Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC14.08□□□□□ -0.16
VSX2P58304 NAT9-222ENST00000583476 583 ntTSL 3 BASIC14.08□□□□□ -0.16
VSX2P58304 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC14.08□□□□□ -0.16
VSX2P58304 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VSX2P58304 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
VSX2P58304 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.16
VSX2P58304 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.08□□□□□ -0.16
VSX2P58304 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VSX2P58304 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
VSX2P58304 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
VSX2P58304 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VSX2P58304 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
VSX2P58304 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
VSX2P58304 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
VSX2P58304 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VSX2P58304 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
VSX2P58304 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
VSX2P58304 KRT8P29-201ENST00000420409 1371 ntBASIC14.08□□□□□ -0.16
VSX2P58304 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
VSX2P58304 AC015688.4-201ENST00000580780 1647 ntBASIC14.08□□□□□ -0.16
VSX2P58304 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VSX2P58304 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
VSX2P58304 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VSX2P58304 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VSX2P58304 AC244394.1-201ENST00000435000 1665 ntBASIC14.07□□□□□ -0.16
VSX2P58304 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VSX2P58304 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
VSX2P58304 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
VSX2P58304 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
VSX2P58304 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
VSX2P58304 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.07□□□□□ -0.16
VSX2P58304 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VSX2P58304 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VSX2P58304 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.07□□□□□ -0.16
VSX2P58304 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
VSX2P58304 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
VSX2P58304 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.07□□□□□ -0.16
VSX2P58304 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
VSX2P58304 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
VSX2P58304 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VSX2P58304 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VSX2P58304 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.07□□□□□ -0.16
VSX2P58304 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
VSX2P58304 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
VSX2P58304 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VSX2P58304 HNRNPA1P32-201ENST00000396326 963 ntBASIC14.07□□□□□ -0.16
VSX2P58304 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC14.07□□□□□ -0.16
VSX2P58304 AL035414.1-201ENST00000451327 857 ntBASIC14.07□□□□□ -0.16
VSX2P58304 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC14.07□□□□□ -0.16
VSX2P58304 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC14.07□□□□□ -0.16
VSX2P58304 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
VSX2P58304 AP001258.2-201ENST00000529891 490 ntBASIC14.07□□□□□ -0.16
VSX2P58304 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC14.07□□□□□ -0.16
VSX2P58304 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC14.07□□□□□ -0.16
VSX2P58304 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC14.07□□□□□ -0.16
VSX2P58304 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
VSX2P58304 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC14.07□□□□□ -0.16
VSX2P58304 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC14.07□□□□□ -0.16
VSX2P58304 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC14.07□□□□□ -0.16
VSX2P58304 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.07□□□□□ -0.16
VSX2P58304 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC14.07□□□□□ -0.16
VSX2P58304 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
VSX2P58304 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VSX2P58304 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.07□□□□□ -0.16
VSX2P58304 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
VSX2P58304 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
VSX2P58304 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VSX2P58304 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
VSX2P58304 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC14.07□□□□□ -0.16
VSX2P58304 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
VSX2P58304 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VSX2P58304 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
VSX2P58304 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
VSX2P58304 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VSX2P58304 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
VSX2P58304 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
VSX2P58304 AC067750.1-201ENST00000608826 6545 ntBASIC14.07□□□□□ -0.16
VSX2P58304 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VSX2P58304 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.07□□□□□ -0.16
VSX2P58304 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VSX2P58304 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VSX2P58304 GRK6P1-201ENST00000400595 1711 ntBASIC14.07□□□□□ -0.16
VSX2P58304 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
VSX2P58304 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.06□□□□□ -0.16
VSX2P58304 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
VSX2P58304 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VSX2P58304 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
VSX2P58304 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.06□□□□□ -0.16
VSX2P58304 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VSX2P58304 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
VSX2P58304 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC14.06□□□□□ -0.16
VSX2P58304 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
VSX2P58304 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VSX2P58304 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VSX2P58304 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
VSX2P58304 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VSX2P58304 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.06□□□□□ -0.16
VSX2P58304 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VSX2P58304 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VSX2P58304 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms