Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLDN8P56748 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLDN8P56748 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CLDN8P56748 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC13.96□□□□□ -0.17
CLDN8P56748 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
CLDN8P56748 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC13.96□□□□□ -0.17
CLDN8P56748 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
CLDN8P56748 TDH-203ENST00000531764 1110 ntBASIC13.96□□□□□ -0.17
CLDN8P56748 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC13.96□□□□□ -0.17
CLDN8P56748 AC190387.1-201ENST00000551683 408 ntBASIC13.96□□□□□ -0.17
CLDN8P56748 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.96□□□□□ -0.17
CLDN8P56748 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLDN8P56748 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.96□□□□□ -0.17
CLDN8P56748 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLDN8P56748 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLDN8P56748 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CLDN8P56748 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLDN8P56748 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.96□□□□□ -0.17
CLDN8P56748 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
CLDN8P56748 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CLDN8P56748 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
CLDN8P56748 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
CLDN8P56748 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CLDN8P56748 CETP-203ENST00000566128 1733 ntTSL 5 BASIC13.95□□□□□ -0.18
CLDN8P56748 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN8P56748 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN8P56748 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.95□□□□□ -0.18
CLDN8P56748 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN8P56748 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN8P56748 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CLDN8P56748 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC13.95□□□□□ -0.18
CLDN8P56748 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN8P56748 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN8P56748 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN8P56748 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN8P56748 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.95□□□□□ -0.18
CLDN8P56748 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN8P56748 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN8P56748 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.95□□□□□ -0.18
CLDN8P56748 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
CLDN8P56748 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN8P56748 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CLDN8P56748 MGST3-203ENST00000367885 680 ntTSL 2 BASIC13.95□□□□□ -0.18
CLDN8P56748 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN8P56748 DGCR5-201ENST00000399539 862 ntBASIC13.95□□□□□ -0.18
CLDN8P56748 AC236430.1-201ENST00000402231 743 ntBASIC13.95□□□□□ -0.18
CLDN8P56748 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN8P56748 BCRP1-201ENST00000444246 691 ntBASIC13.95□□□□□ -0.18
CLDN8P56748 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN8P56748 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.95□□□□□ -0.18
CLDN8P56748 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.95□□□□□ -0.18
CLDN8P56748 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC13.95□□□□□ -0.18
CLDN8P56748 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC13.95□□□□□ -0.18
CLDN8P56748 AC027796.2-201ENST00000575326 344 ntBASIC13.95□□□□□ -0.18
CLDN8P56748 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC13.95□□□□□ -0.18
CLDN8P56748 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC13.95□□□□□ -0.18
CLDN8P56748 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN8P56748 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC13.95□□□□□ -0.18
CLDN8P56748 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.95□□□□□ -0.18
CLDN8P56748 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN8P56748 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CLDN8P56748 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN8P56748 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN8P56748 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN8P56748 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CLDN8P56748 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.95□□□□□ -0.18
CLDN8P56748 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN8P56748 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CLDN8P56748 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CLDN8P56748 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN8P56748 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.95□□□□□ -0.18
CLDN8P56748 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN8P56748 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.95□□□□□ -0.18
CLDN8P56748 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN8P56748 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN8P56748 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLDN8P56748 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN8P56748 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN8P56748 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC13.94□□□□□ -0.18
CLDN8P56748 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN8P56748 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
CLDN8P56748 AL157996.1-201ENST00000624684 2299 ntBASIC13.94□□□□□ -0.18
CLDN8P56748 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
CLDN8P56748 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN8P56748 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN8P56748 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN8P56748 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CLDN8P56748 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
CLDN8P56748 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN8P56748 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN8P56748 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN8P56748 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
CLDN8P56748 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN8P56748 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN8P56748 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.94□□□□□ -0.18
CLDN8P56748 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CLDN8P56748 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLDN8P56748 AC004945.1-201ENST00000416738 983 ntBASIC13.94□□□□□ -0.18
CLDN8P56748 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.94□□□□□ -0.18
CLDN8P56748 AL161932.2-201ENST00000435436 679 ntBASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms