Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 SKA2-202ENST00000437036 625 ntTSL 2 BASIC14.3□□□□□ -0.12
AP1S2P56377 U91328.1-201ENST00000437528 223 ntBASIC14.3□□□□□ -0.12
AP1S2P56377 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC14.3□□□□□ -0.12
AP1S2P56377 AC104989.1-201ENST00000519711 778 ntBASIC14.3□□□□□ -0.12
AP1S2P56377 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC14.3□□□□□ -0.12
AP1S2P56377 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC14.3□□□□□ -0.12
AP1S2P56377 RPS24-214ENST00000613865 538 ntTSL 5 BASIC14.3□□□□□ -0.12
AP1S2P56377 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.3□□□□□ -0.12
AP1S2P56377 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC14.3□□□□□ -0.12
AP1S2P56377 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP1S2P56377 AL035252.4-201ENST00000624174 288 ntBASIC14.3□□□□□ -0.12
AP1S2P56377 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC14.3□□□□□ -0.12
AP1S2P56377 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
AP1S2P56377 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
AP1S2P56377 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC14.3□□□□□ -0.12
AP1S2P56377 AC136759.1-202ENST00000530858 2194 ntBASIC14.3□□□□□ -0.12
AP1S2P56377 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
AP1S2P56377 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC14.3□□□□□ -0.12
AP1S2P56377 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP1S2P56377 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
AP1S2P56377 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP1S2P56377 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
AP1S2P56377 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
AP1S2P56377 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.3□□□□□ -0.12
AP1S2P56377 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP1S2P56377 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.29□□□□□ -0.12
AP1S2P56377 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
AP1S2P56377 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP1S2P56377 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.29□□□□□ -0.12
AP1S2P56377 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
AP1S2P56377 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
AP1S2P56377 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP1S2P56377 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP1S2P56377 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.29□□□□□ -0.12
AP1S2P56377 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
AP1S2P56377 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP1S2P56377 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.29□□□□□ -0.12
AP1S2P56377 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.29□□□□□ -0.12
AP1S2P56377 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC14.29□□□□□ -0.12
AP1S2P56377 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP1S2P56377 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC14.29□□□□□ -0.12
AP1S2P56377 AC079776.1-201ENST00000401540 1152 ntBASIC14.29□□□□□ -0.12
AP1S2P56377 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC14.29□□□□□ -0.12
AP1S2P56377 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC14.29□□□□□ -0.12
AP1S2P56377 AC026954.1-201ENST00000429771 1293 ntBASIC14.29□□□□□ -0.12
AP1S2P56377 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC14.29□□□□□ -0.12
AP1S2P56377 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC14.29□□□□□ -0.12
AP1S2P56377 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC14.29□□□□□ -0.12
AP1S2P56377 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC14.29□□□□□ -0.12
AP1S2P56377 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
AP1S2P56377 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC14.29□□□□□ -0.12
AP1S2P56377 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC14.29□□□□□ -0.12
AP1S2P56377 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC14.29□□□□□ -0.12
AP1S2P56377 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP1S2P56377 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP1S2P56377 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC14.29□□□□□ -0.12
AP1S2P56377 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP1S2P56377 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP1S2P56377 TCAM1P-207ENST00000485295 1537 ntBASIC14.29□□□□□ -0.12
AP1S2P56377 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
AP1S2P56377 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP1S2P56377 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC14.29□□□□□ -0.12
AP1S2P56377 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.29□□□□□ -0.12
AP1S2P56377 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.29□□□□□ -0.12
AP1S2P56377 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC14.29□□□□□ -0.12
AP1S2P56377 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC14.29□□□□□ -0.12
AP1S2P56377 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.29□□□□□ -0.12
AP1S2P56377 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP1S2P56377 AC011498.7-201ENST00000624986 2027 ntBASIC14.29□□□□□ -0.12
AP1S2P56377 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP1S2P56377 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
AP1S2P56377 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
AP1S2P56377 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
AP1S2P56377 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.28□□□□□ -0.12
AP1S2P56377 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP1S2P56377 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP1S2P56377 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP1S2P56377 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP1S2P56377 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.28□□□□□ -0.12
AP1S2P56377 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.28□□□□□ -0.12
AP1S2P56377 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP1S2P56377 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP1S2P56377 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.28□□□□□ -0.12
AP1S2P56377 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP1S2P56377 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
AP1S2P56377 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.28□□□□□ -0.12
AP1S2P56377 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP1S2P56377 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
AP1S2P56377 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
AP1S2P56377 MIR326-201ENST00000362220 95 ntBASIC14.28□□□□□ -0.12
AP1S2P56377 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP1S2P56377 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP1S2P56377 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP1S2P56377 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP1S2P56377 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP1S2P56377 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
AP1S2P56377 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
AP1S2P56377 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.28□□□□□ -0.12
AP1S2P56377 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC14.28□□□□□ -0.12
AP1S2P56377 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms