Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LIMK2P53671 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LIMK2P53671 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
LIMK2P53671 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LIMK2P53671 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LIMK2P53671 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LIMK2P53671 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.82□□□□□ -0.04
LIMK2P53671 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
LIMK2P53671 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC14.82□□□□□ -0.04
LIMK2P53671 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC14.82□□□□□ -0.04
LIMK2P53671 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC14.82□□□□□ -0.04
LIMK2P53671 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
LIMK2P53671 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.82□□□□□ -0.04
LIMK2P53671 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
LIMK2P53671 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14.82□□□□□ -0.04
LIMK2P53671 AGER-214ENST00000538695 487 ntTSL 2 BASIC14.82□□□□□ -0.04
LIMK2P53671 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC14.82□□□□□ -0.04
LIMK2P53671 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC14.82□□□□□ -0.04
LIMK2P53671 RN7SL560P-201ENST00000577943 264 ntBASIC14.82□□□□□ -0.04
LIMK2P53671 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
LIMK2P53671 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
LIMK2P53671 AC009542.2-202ENST00000619004 1067 ntBASIC14.82□□□□□ -0.04
LIMK2P53671 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LIMK2P53671 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC14.82□□□□□ -0.04
LIMK2P53671 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.82□□□□□ -0.04
LIMK2P53671 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
LIMK2P53671 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
LIMK2P53671 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
LIMK2P53671 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
LIMK2P53671 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LIMK2P53671 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.82□□□□□ -0.04
LIMK2P53671 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.82□□□□□ -0.04
LIMK2P53671 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LIMK2P53671 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LIMK2P53671 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.82□□□□□ -0.04
LIMK2P53671 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
LIMK2P53671 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LIMK2P53671 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LIMK2P53671 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
LIMK2P53671 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LIMK2P53671 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LIMK2P53671 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.82□□□□□ -0.04
LIMK2P53671 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
LIMK2P53671 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LIMK2P53671 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.81□□□□□ -0.04
LIMK2P53671 KRT8P24-201ENST00000560290 1559 ntBASIC14.81□□□□□ -0.04
LIMK2P53671 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LIMK2P53671 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.81□□□□□ -0.04
LIMK2P53671 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.81□□□□□ -0.04
LIMK2P53671 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LIMK2P53671 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LIMK2P53671 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LIMK2P53671 AL138709.1-201ENST00000614840 1693 ntBASIC14.81□□□□□ -0.04
LIMK2P53671 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
LIMK2P53671 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
LIMK2P53671 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.81□□□□□ -0.04
LIMK2P53671 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LIMK2P53671 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.81□□□□□ -0.04
LIMK2P53671 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LIMK2P53671 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LIMK2P53671 AC215219.1-201ENST00000400706 1817 ntBASIC14.81□□□□□ -0.04
LIMK2P53671 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LIMK2P53671 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LIMK2P53671 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
LIMK2P53671 RN7SKP230-201ENST00000365642 335 ntBASIC14.81□□□□□ -0.04
LIMK2P53671 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LIMK2P53671 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
LIMK2P53671 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC14.81□□□□□ -0.04
LIMK2P53671 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC14.81□□□□□ -0.04
LIMK2P53671 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.81□□□□□ -0.04
LIMK2P53671 FAM197Y7-201ENST00000432892 766 ntBASIC14.81□□□□□ -0.04
LIMK2P53671 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LIMK2P53671 RPL13AP20-201ENST00000459725 609 ntBASIC14.81□□□□□ -0.04
LIMK2P53671 AC108725.1-201ENST00000495472 409 ntBASIC14.81□□□□□ -0.04
LIMK2P53671 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC14.81□□□□□ -0.04
LIMK2P53671 GCOM2-201ENST00000509133 1104 ntBASIC14.81□□□□□ -0.04
LIMK2P53671 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.81□□□□□ -0.04
LIMK2P53671 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC14.81□□□□□ -0.04
LIMK2P53671 DERL2-202ENST00000570848 657 ntTSL 5 BASIC14.81□□□□□ -0.04
LIMK2P53671 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LIMK2P53671 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC14.81□□□□□ -0.04
LIMK2P53671 MIR6787-201ENST00000616675 61 ntBASIC14.81□□□□□ -0.04
LIMK2P53671 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
LIMK2P53671 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.81□□□□□ -0.04
LIMK2P53671 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LIMK2P53671 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LIMK2P53671 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LIMK2P53671 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
LIMK2P53671 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LIMK2P53671 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LIMK2P53671 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LIMK2P53671 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC14.81□□□□□ -0.04
LIMK2P53671 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LIMK2P53671 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.81□□□□□ -0.04
LIMK2P53671 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LIMK2P53671 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.81□□□□□ -0.04
LIMK2P53671 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LIMK2P53671 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
LIMK2P53671 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
LIMK2P53671 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms