Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
CX3CR1P49238 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CX3CR1P49238 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CX3CR1P49238 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CX3CR1P49238 ADK-205ENST00000539909 1866 ntTSL 2 BASIC12.95□□□□□ -0.34
CX3CR1P49238 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CX3CR1P49238 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CX3CR1P49238 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
CX3CR1P49238 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CX3CR1P49238 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CX3CR1P49238 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CX3CR1P49238 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC12.95□□□□□ -0.34
CX3CR1P49238 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
CX3CR1P49238 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CX3CR1P49238 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CX3CR1P49238 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC12.95□□□□□ -0.34
CX3CR1P49238 AP006294.1-201ENST00000415407 339 ntBASIC12.95□□□□□ -0.34
CX3CR1P49238 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC12.95□□□□□ -0.34
CX3CR1P49238 ACTG1P3-201ENST00000431775 1114 ntBASIC12.95□□□□□ -0.34
CX3CR1P49238 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC12.95□□□□□ -0.34
CX3CR1P49238 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CX3CR1P49238 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CX3CR1P49238 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC12.95□□□□□ -0.34
CX3CR1P49238 VPS18-202ENST00000558474 873 ntTSL 3 BASIC12.95□□□□□ -0.34
CX3CR1P49238 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CX3CR1P49238 MIR5189-201ENST00000577370 114 ntBASIC12.95□□□□□ -0.34
CX3CR1P49238 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CX3CR1P49238 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC12.95□□□□□ -0.34
CX3CR1P49238 AC010319.3-201ENST00000597028 470 ntBASIC12.95□□□□□ -0.34
CX3CR1P49238 AL355385.1-201ENST00000606123 409 ntBASIC12.95□□□□□ -0.34
CX3CR1P49238 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CX3CR1P49238 APP-205ENST00000358918 2366 ntTSL 5 BASIC12.95□□□□□ -0.34
CX3CR1P49238 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CX3CR1P49238 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
CX3CR1P49238 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CX3CR1P49238 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CX3CR1P49238 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC12.95□□□□□ -0.34
CX3CR1P49238 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CX3CR1P49238 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CX3CR1P49238 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CX3CR1P49238 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CX3CR1P49238 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CX3CR1P49238 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
CX3CR1P49238 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CX3CR1P49238 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
CX3CR1P49238 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CX3CR1P49238 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
CX3CR1P49238 RN7SL832P-201ENST00000607781 1756 ntBASIC12.94□□□□□ -0.34
CX3CR1P49238 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC12.94□□□□□ -0.34
CX3CR1P49238 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CX3CR1P49238 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
CX3CR1P49238 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC12.94□□□□□ -0.34
CX3CR1P49238 FKBP4P6-201ENST00000457486 1332 ntBASIC12.94□□□□□ -0.34
CX3CR1P49238 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CX3CR1P49238 AC012617.1-204ENST00000586340 2305 ntBASIC12.94□□□□□ -0.34
CX3CR1P49238 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CX3CR1P49238 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CX3CR1P49238 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CX3CR1P49238 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CX3CR1P49238 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CX3CR1P49238 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CX3CR1P49238 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC12.94□□□□□ -0.34
CX3CR1P49238 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CX3CR1P49238 AC020910.5-201ENST00000623668 1865 ntBASIC12.94□□□□□ -0.34
CX3CR1P49238 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CX3CR1P49238 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CX3CR1P49238 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
CX3CR1P49238 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC12.94□□□□□ -0.34
CX3CR1P49238 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
CX3CR1P49238 POM121L8P-201ENST00000417732 1281 ntBASIC12.94□□□□□ -0.34
CX3CR1P49238 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC12.94□□□□□ -0.34
CX3CR1P49238 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CX3CR1P49238 POM121L9P-203ENST00000441984 1285 ntBASIC12.94□□□□□ -0.34
CX3CR1P49238 MESTP3-201ENST00000503460 968 ntBASIC12.94□□□□□ -0.34
CX3CR1P49238 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC12.94□□□□□ -0.34
CX3CR1P49238 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CX3CR1P49238 RN7SL48P-201ENST00000579283 293 ntBASIC12.94□□□□□ -0.34
CX3CR1P49238 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC12.94□□□□□ -0.34
CX3CR1P49238 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC12.94□□□□□ -0.34
CX3CR1P49238 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC12.94□□□□□ -0.34
CX3CR1P49238 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC12.94□□□□□ -0.34
CX3CR1P49238 AC138466.3-201ENST00000619983 221 ntBASIC12.94□□□□□ -0.34
CX3CR1P49238 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC12.94□□□□□ -0.34
CX3CR1P49238 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CX3CR1P49238 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CX3CR1P49238 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
CX3CR1P49238 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
CX3CR1P49238 AC090505.1-201ENST00000430515 1834 ntBASIC12.94□□□□□ -0.34
CX3CR1P49238 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC12.94□□□□□ -0.34
CX3CR1P49238 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CX3CR1P49238 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CX3CR1P49238 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC12.94□□□□□ -0.34
CX3CR1P49238 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CX3CR1P49238 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC12.94□□□□□ -0.34
CX3CR1P49238 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
CX3CR1P49238 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CX3CR1P49238 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CX3CR1P49238 GOLGA8VP-201ENST00000559009 1798 ntBASIC12.94□□□□□ -0.34
CX3CR1P49238 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CX3CR1P49238 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms