Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CSNK1A1P48729 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.11□□□□□ -0.31
CSNK1A1P48729 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSNK1A1P48729 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSNK1A1P48729 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSNK1A1P48729 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.11□□□□□ -0.31
CSNK1A1P48729 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CSNK1A1P48729 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.1□□□□□ -0.31
CSNK1A1P48729 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.1□□□□□ -0.31
CSNK1A1P48729 KRT8P4-201ENST00000509735 1454 ntBASIC13.1□□□□□ -0.31
CSNK1A1P48729 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CSNK1A1P48729 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.1□□□□□ -0.31
CSNK1A1P48729 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CSNK1A1P48729 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CSNK1A1P48729 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CSNK1A1P48729 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CSNK1A1P48729 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CSNK1A1P48729 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CSNK1A1P48729 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CSNK1A1P48729 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CSNK1A1P48729 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CSNK1A1P48729 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CSNK1A1P48729 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CSNK1A1P48729 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CSNK1A1P48729 PGF-202ENST00000405431 666 ntTSL 5 BASIC13.1□□□□□ -0.31
CSNK1A1P48729 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC13.1□□□□□ -0.31
CSNK1A1P48729 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CSNK1A1P48729 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.1□□□□□ -0.31
CSNK1A1P48729 U91328.1-201ENST00000437528 223 ntBASIC13.1□□□□□ -0.31
CSNK1A1P48729 AL355994.2-201ENST00000447882 704 ntBASIC13.1□□□□□ -0.31
CSNK1A1P48729 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CSNK1A1P48729 GPR53P-205ENST00000457298 1084 ntBASIC13.1□□□□□ -0.31
CSNK1A1P48729 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC13.1□□□□□ -0.31
CSNK1A1P48729 AC104989.1-201ENST00000519711 778 ntBASIC13.1□□□□□ -0.31
CSNK1A1P48729 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC13.1□□□□□ -0.31
CSNK1A1P48729 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC13.1□□□□□ -0.31
CSNK1A1P48729 AC023310.1-201ENST00000554836 735 ntBASIC13.1□□□□□ -0.31
CSNK1A1P48729 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC13.1□□□□□ -0.31
CSNK1A1P48729 PPY2P-201ENST00000582808 702 ntBASIC13.1□□□□□ -0.31
CSNK1A1P48729 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CSNK1A1P48729 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.1□□□□□ -0.31
CSNK1A1P48729 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CSNK1A1P48729 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CSNK1A1P48729 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CSNK1A1P48729 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.1□□□□□ -0.31
CSNK1A1P48729 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CSNK1A1P48729 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CSNK1A1P48729 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CSNK1A1P48729 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CSNK1A1P48729 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CSNK1A1P48729 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CSNK1A1P48729 AC139712.1-201ENST00000378256 1875 ntBASIC13.1□□□□□ -0.31
CSNK1A1P48729 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.1□□□□□ -0.31
CSNK1A1P48729 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
CSNK1A1P48729 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.1□□□□□ -0.31
CSNK1A1P48729 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CSNK1A1P48729 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
CSNK1A1P48729 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.1□□□□□ -0.31
CSNK1A1P48729 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
CSNK1A1P48729 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CSNK1A1P48729 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
CSNK1A1P48729 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CSNK1A1P48729 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.1□□□□□ -0.31
CSNK1A1P48729 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CSNK1A1P48729 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.09□□□□□ -0.31
CSNK1A1P48729 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CSNK1A1P48729 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CSNK1A1P48729 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CSNK1A1P48729 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.09□□□□□ -0.31
CSNK1A1P48729 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CSNK1A1P48729 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.09□□□□□ -0.31
CSNK1A1P48729 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CSNK1A1P48729 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CSNK1A1P48729 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC13.09□□□□□ -0.31
CSNK1A1P48729 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.09□□□□□ -0.31
CSNK1A1P48729 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.09□□□□□ -0.31
CSNK1A1P48729 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
CSNK1A1P48729 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CSNK1A1P48729 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CSNK1A1P48729 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.09□□□□□ -0.31
CSNK1A1P48729 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
CSNK1A1P48729 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC13.09□□□□□ -0.31
CSNK1A1P48729 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC13.09□□□□□ -0.31
CSNK1A1P48729 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC13.09□□□□□ -0.31
CSNK1A1P48729 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
CSNK1A1P48729 HOMER2P2-201ENST00000451621 847 ntBASIC13.09□□□□□ -0.31
CSNK1A1P48729 PFN2-215ENST00000497148 743 ntTSL 4 BASIC13.09□□□□□ -0.31
CSNK1A1P48729 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
CSNK1A1P48729 AC103988.2-201ENST00000561804 725 ntBASIC13.09□□□□□ -0.31
CSNK1A1P48729 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC13.09□□□□□ -0.31
CSNK1A1P48729 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CSNK1A1P48729 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC13.09□□□□□ -0.31
CSNK1A1P48729 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
CSNK1A1P48729 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.09□□□□□ -0.31
CSNK1A1P48729 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
CSNK1A1P48729 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
CSNK1A1P48729 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CSNK1A1P48729 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CSNK1A1P48729 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
CSNK1A1P48729 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms