Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AL096865.1-201ENST00000606796 927 ntBASIC15.74■□□□□ 0.11
SSR1P43307 AP005019.2-201ENST00000615104 511 ntBASIC15.74■□□□□ 0.11
SSR1P43307 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
SSR1P43307 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SSR1P43307 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC15.74■□□□□ 0.11
SSR1P43307 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.74■□□□□ 0.11
SSR1P43307 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
SSR1P43307 AL354702.1-201ENST00000442006 1960 ntBASIC15.74■□□□□ 0.11
SSR1P43307 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SSR1P43307 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.74■□□□□ 0.11
SSR1P43307 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SSR1P43307 SALL4P5-201ENST00000419001 1760 ntBASIC15.74■□□□□ 0.11
SSR1P43307 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
SSR1P43307 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC15.74■□□□□ 0.11
SSR1P43307 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
SSR1P43307 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SSR1P43307 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.74■□□□□ 0.11
SSR1P43307 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SSR1P43307 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
SSR1P43307 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
SSR1P43307 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC15.74■□□□□ 0.11
SSR1P43307 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC15.74■□□□□ 0.11
SSR1P43307 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.74■□□□□ 0.11
SSR1P43307 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SSR1P43307 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SSR1P43307 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
SSR1P43307 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
SSR1P43307 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
SSR1P43307 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SSR1P43307 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
SSR1P43307 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.73■□□□□ 0.11
SSR1P43307 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SSR1P43307 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
SSR1P43307 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC15.73■□□□□ 0.11
SSR1P43307 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.73■□□□□ 0.11
SSR1P43307 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SSR1P43307 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC15.73■□□□□ 0.11
SSR1P43307 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.73■□□□□ 0.11
SSR1P43307 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SSR1P43307 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.73■□□□□ 0.11
SSR1P43307 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SSR1P43307 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SSR1P43307 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
SSR1P43307 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.73■□□□□ 0.11
SSR1P43307 OARD1-208ENST00000469104 704 ntTSL 2 BASIC15.73■□□□□ 0.11
SSR1P43307 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SSR1P43307 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.73■□□□□ 0.11
SSR1P43307 DUX4L47-201ENST00000566374 394 ntBASIC15.73■□□□□ 0.11
SSR1P43307 AC140912.1-201ENST00000577171 1054 ntBASIC15.73■□□□□ 0.11
SSR1P43307 MIR4745-201ENST00000577608 62 ntBASIC15.73■□□□□ 0.11
SSR1P43307 WFDC1-204ENST00000613603 549 ntBASIC15.73■□□□□ 0.11
SSR1P43307 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.73■□□□□ 0.11
SSR1P43307 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC15.73■□□□□ 0.11
SSR1P43307 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
SSR1P43307 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
SSR1P43307 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC15.73■□□□□ 0.11
SSR1P43307 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SSR1P43307 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SSR1P43307 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC15.73■□□□□ 0.11
SSR1P43307 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SSR1P43307 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SSR1P43307 MEX3B-202ENST00000558133 4333 ntBASIC15.73■□□□□ 0.11
SSR1P43307 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
SSR1P43307 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC15.73■□□□□ 0.11
SSR1P43307 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SSR1P43307 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
SSR1P43307 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC15.73■□□□□ 0.11
SSR1P43307 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC15.73■□□□□ 0.11
SSR1P43307 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SSR1P43307 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
SSR1P43307 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SSR1P43307 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC15.73■□□□□ 0.11
SSR1P43307 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SSR1P43307 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SSR1P43307 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
SSR1P43307 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
SSR1P43307 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
SSR1P43307 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SSR1P43307 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SSR1P43307 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SSR1P43307 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.72■□□□□ 0.11
SSR1P43307 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SSR1P43307 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.72■□□□□ 0.11
SSR1P43307 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SSR1P43307 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC15.72■□□□□ 0.11
SSR1P43307 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SSR1P43307 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15.72■□□□□ 0.11
SSR1P43307 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.72■□□□□ 0.11
SSR1P43307 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SSR1P43307 STRCP1-201ENST00000509801 5328 ntBASIC15.72■□□□□ 0.11
SSR1P43307 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SSR1P43307 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
SSR1P43307 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
SSR1P43307 PIN1P1-201ENST00000412108 996 ntBASIC15.72■□□□□ 0.11
SSR1P43307 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.72■□□□□ 0.11
SSR1P43307 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.72■□□□□ 0.11
SSR1P43307 EIF3FP3-201ENST00000434851 1086 ntBASIC15.72■□□□□ 0.11
SSR1P43307 AL162726.2-201ENST00000438986 1017 ntBASIC15.72■□□□□ 0.11
SSR1P43307 GIMAP3P-201ENST00000495150 836 ntBASIC15.72■□□□□ 0.11
SSR1P43307 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms