Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
HTTP42858 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
HTTP42858 CD44-203ENST00000278386 484 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HTTP42858 S100B-201ENST00000291700 877 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HTTP42858 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HTTP42858 UCN3-201ENST00000380433 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HTTP42858 RBPMSLP-201ENST00000433427 502 ntBASIC15.88■□□□□ 0.13
HTTP42858 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
HTTP42858 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
HTTP42858 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HTTP42858 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HTTP42858 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.87■□□□□ 0.13
HTTP42858 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HTTP42858 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HTTP42858 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
HTTP42858 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.87■□□□□ 0.13
HTTP42858 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HTTP42858 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
HTTP42858 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
HTTP42858 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HTTP42858 AC140658.4-201ENST00000561990 352 ntBASIC15.87■□□□□ 0.13
HTTP42858 AC022001.3-201ENST00000606330 596 ntBASIC15.87■□□□□ 0.13
HTTP42858 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HTTP42858 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HTTP42858 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HTTP42858 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HTTP42858 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HTTP42858 AC015688.4-201ENST00000580780 1647 ntBASIC15.87■□□□□ 0.13
HTTP42858 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
HTTP42858 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.87■□□□□ 0.13
HTTP42858 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HTTP42858 DLG4-206ENST00000485100 1004 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HTTP42858 AC099328.1-201ENST00000498809 1030 ntBASIC15.87■□□□□ 0.13
HTTP42858 ACTBP9-201ENST00000587663 1099 ntBASIC15.87■□□□□ 0.13
HTTP42858 AL009176.1-201ENST00000607876 650 ntBASIC15.87■□□□□ 0.13
HTTP42858 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC15.87■□□□□ 0.13
HTTP42858 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
HTTP42858 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.87■□□□□ 0.13
HTTP42858 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.87■□□□□ 0.13
HTTP42858 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HTTP42858 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC15.86■□□□□ 0.13
HTTP42858 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HTTP42858 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC15.86■□□□□ 0.13
HTTP42858 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HTTP42858 ABCD1P4-201ENST00000399687 604 ntBASIC15.86■□□□□ 0.13
HTTP42858 SNRPCP15-201ENST00000424055 192 ntBASIC15.86■□□□□ 0.13
HTTP42858 PLA2G15-203ENST00000444212 943 ntTSL 2 BASIC15.86■□□□□ 0.13
HTTP42858 AC004801.1-201ENST00000549557 360 ntBASIC15.86■□□□□ 0.13
HTTP42858 BOLA3P2-201ENST00000586496 323 ntBASIC15.86■□□□□ 0.13
HTTP42858 AC007292.1-201ENST00000594444 746 ntTSL 2 BASIC15.86■□□□□ 0.13
HTTP42858 CCDC32-215ENST00000625629 801 ntTSL 5 BASIC15.86■□□□□ 0.13
HTTP42858 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HTTP42858 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
HTTP42858 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HTTP42858 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HTTP42858 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HTTP42858 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HTTP42858 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HTTP42858 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
HTTP42858 CCL17-201ENST00000219244 615 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HTTP42858 NR1I3-201ENST00000367979 1074 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HTTP42858 NR1I3-207ENST00000367985 1074 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HTTP42858 CD3G-202ENST00000392883 1179 ntTSL 5 BASIC15.86■□□□□ 0.13
HTTP42858 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HTTP42858 AL954722.1-201ENST00000431238 259 ntBASIC15.86■□□□□ 0.13
HTTP42858 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC15.86■□□□□ 0.13
HTTP42858 NALT1-202ENST00000450304 437 ntTSL 3 BASIC15.86■□□□□ 0.13
HTTP42858 PSME2P2-201ENST00000453033 700 ntBASIC15.86■□□□□ 0.13
HTTP42858 NR1I3-225ENST00000508387 634 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HTTP42858 OR52V1P-201ENST00000515557 898 ntBASIC15.86■□□□□ 0.13
HTTP42858 AC132812.1-201ENST00000583145 892 ntBASIC15.86■□□□□ 0.13
HTTP42858 KRTAP10-4-202ENST00000616689 597 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
HTTP42858 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HTTP42858 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HTTP42858 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.86■□□□□ 0.13
HTTP42858 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.86■□□□□ 0.13
HTTP42858 EXOSC7-201ENST00000265564 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HTTP42858 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
HTTP42858 S100A2-202ENST00000368708 998 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HTTP42858 SSR4-202ENST00000370085 526 ntTSL 2 BASIC15.85■□□□□ 0.13
HTTP42858 PLA2G2A-201ENST00000375111 970 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HTTP42858 MACROD2-204ENST00000407045 727 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HTTP42858 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC15.85■□□□□ 0.13
HTTP42858 RN7SL672P-201ENST00000474091 317 ntBASIC15.85■□□□□ 0.13
HTTP42858 RNA5SP420-201ENST00000516997 137 ntBASIC15.85■□□□□ 0.13
HTTP42858 AC009041.4-201ENST00000620075 638 ntBASIC15.85■□□□□ 0.13
HTTP42858 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
HTTP42858 AC092115.1-201ENST00000566277 1402 ntBASIC15.85■□□□□ 0.13
HTTP42858 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.85■□□□□ 0.13
HTTP42858 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
HTTP42858 AK6-202ENST00000380822 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HTTP42858 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HTTP42858 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HTTP42858 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC15.85■□□□□ 0.13
HTTP42858 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HTTP42858 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
HTTP42858 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC15.85■□□□□ 0.13
HTTP42858 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC15.85■□□□□ 0.13
HTTP42858 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC15.85■□□□□ 0.13
HTTP42858 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms