Protein–RNA interactions for Protein: P42773

CDKN2C, Cyclin-dependent kinase 4 inhibitor C, humanhuman

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2CP42773 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CDKN2CP42773 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CDKN2CP42773 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
CDKN2CP42773 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CDKN2CP42773 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDKN2CP42773 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CDKN2CP42773 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CDKN2CP42773 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC13.9□□□□□ -0.18
CDKN2CP42773 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.19
CDKN2CP42773 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDKN2CP42773 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDKN2CP42773 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CDKN2CP42773 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC13.89□□□□□ -0.19
CDKN2CP42773 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDKN2CP42773 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CDKN2CP42773 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
CDKN2CP42773 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDKN2CP42773 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC13.89□□□□□ -0.19
CDKN2CP42773 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDKN2CP42773 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.89□□□□□ -0.19
CDKN2CP42773 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
CDKN2CP42773 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDKN2CP42773 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDKN2CP42773 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDKN2CP42773 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
CDKN2CP42773 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDKN2CP42773 MIR770-201ENST00000390219 98 ntBASIC13.89□□□□□ -0.19
CDKN2CP42773 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CDKN2CP42773 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.89□□□□□ -0.19
CDKN2CP42773 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC13.89□□□□□ -0.19
CDKN2CP42773 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC13.89□□□□□ -0.19
CDKN2CP42773 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC13.89□□□□□ -0.19
CDKN2CP42773 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC13.89□□□□□ -0.19
CDKN2CP42773 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.89□□□□□ -0.19
CDKN2CP42773 BX088702.1-201ENST00000610784 235 ntBASIC13.89□□□□□ -0.19
CDKN2CP42773 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC13.89□□□□□ -0.19
CDKN2CP42773 AL033527.5-201ENST00000641382 801 ntBASIC13.89□□□□□ -0.19
CDKN2CP42773 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
CDKN2CP42773 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDKN2CP42773 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
CDKN2CP42773 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDKN2CP42773 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
CDKN2CP42773 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDKN2CP42773 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDKN2CP42773 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC13.89□□□□□ -0.19
CDKN2CP42773 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC13.89□□□□□ -0.19
CDKN2CP42773 AL137784.3-201ENST00000623858 2288 ntBASIC13.89□□□□□ -0.19
CDKN2CP42773 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDKN2CP42773 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDKN2CP42773 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CDKN2CP42773 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDKN2CP42773 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
CDKN2CP42773 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CDKN2CP42773 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDKN2CP42773 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CDKN2CP42773 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CDKN2CP42773 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CDKN2CP42773 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDKN2CP42773 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CDKN2CP42773 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC13.88□□□□□ -0.19
CDKN2CP42773 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDKN2CP42773 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
CDKN2CP42773 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDKN2CP42773 AL138709.1-201ENST00000614840 1693 ntBASIC13.88□□□□□ -0.19
CDKN2CP42773 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC13.88□□□□□ -0.19
CDKN2CP42773 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CDKN2CP42773 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDKN2CP42773 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDKN2CP42773 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDKN2CP42773 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CDKN2CP42773 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDKN2CP42773 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDKN2CP42773 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDKN2CP42773 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CDKN2CP42773 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.88□□□□□ -0.19
CDKN2CP42773 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CDKN2CP42773 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CDKN2CP42773 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC13.88□□□□□ -0.19
CDKN2CP42773 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CDKN2CP42773 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
CDKN2CP42773 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDKN2CP42773 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDKN2CP42773 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC13.88□□□□□ -0.19
CDKN2CP42773 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.88□□□□□ -0.19
CDKN2CP42773 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC13.88□□□□□ -0.19
CDKN2CP42773 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.88□□□□□ -0.19
CDKN2CP42773 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.88□□□□□ -0.19
CDKN2CP42773 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC13.88□□□□□ -0.19
CDKN2CP42773 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC13.88□□□□□ -0.19
CDKN2CP42773 AC009486.1-201ENST00000569860 813 ntBASIC13.88□□□□□ -0.19
CDKN2CP42773 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13.88□□□□□ -0.19
CDKN2CP42773 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC13.88□□□□□ -0.19
CDKN2CP42773 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CDKN2CP42773 RN7SL204P-201ENST00000582831 262 ntBASIC13.88□□□□□ -0.19
CDKN2CP42773 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
CDKN2CP42773 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDKN2CP42773 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.88□□□□□ -0.19
CDKN2CP42773 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDKN2CP42773 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.88□□□□□ -0.19
CDKN2CP42773 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms