Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CEACAM3P40198 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CEACAM3P40198 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
CEACAM3P40198 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CEACAM3P40198 APOC3-202ENST00000375345 604 ntTSL 5 BASIC12.04□□□□□ -0.48
CEACAM3P40198 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
CEACAM3P40198 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC12.04□□□□□ -0.48
CEACAM3P40198 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CEACAM3P40198 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
CEACAM3P40198 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC12.04□□□□□ -0.48
CEACAM3P40198 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC12.04□□□□□ -0.48
CEACAM3P40198 HLA-V-201ENST00000429037 534 ntBASIC12.04□□□□□ -0.48
CEACAM3P40198 AC026954.1-201ENST00000429771 1293 ntBASIC12.04□□□□□ -0.48
CEACAM3P40198 CNN2P10-201ENST00000443067 918 ntBASIC12.04□□□□□ -0.48
CEACAM3P40198 PUDPP3-201ENST00000445368 636 ntBASIC12.04□□□□□ -0.48
CEACAM3P40198 CSF2RBP1-201ENST00000447905 391 ntBASIC12.04□□□□□ -0.48
CEACAM3P40198 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CEACAM3P40198 PFN2-215ENST00000497148 743 ntTSL 4 BASIC12.04□□□□□ -0.48
CEACAM3P40198 NCK2-206ENST00000522586 490 ntTSL 5 BASIC12.04□□□□□ -0.48
CEACAM3P40198 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CEACAM3P40198 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC12.04□□□□□ -0.48
CEACAM3P40198 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC12.04□□□□□ -0.48
CEACAM3P40198 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC12.04□□□□□ -0.48
CEACAM3P40198 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC12.04□□□□□ -0.48
CEACAM3P40198 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
CEACAM3P40198 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC12.04□□□□□ -0.48
CEACAM3P40198 AC010328.2-201ENST00000597698 1111 ntBASIC12.04□□□□□ -0.48
CEACAM3P40198 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC12.04□□□□□ -0.48
CEACAM3P40198 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CEACAM3P40198 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CEACAM3P40198 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC12.04□□□□□ -0.48
CEACAM3P40198 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CEACAM3P40198 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CEACAM3P40198 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC12.04□□□□□ -0.48
CEACAM3P40198 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CEACAM3P40198 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC12.04□□□□□ -0.48
CEACAM3P40198 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC12.04□□□□□ -0.48
CEACAM3P40198 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CEACAM3P40198 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC12.04□□□□□ -0.48
CEACAM3P40198 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CEACAM3P40198 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
CEACAM3P40198 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC12.04□□□□□ -0.48
CEACAM3P40198 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC12.04□□□□□ -0.48
CEACAM3P40198 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CEACAM3P40198 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CEACAM3P40198 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CEACAM3P40198 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CEACAM3P40198 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC12.04□□□□□ -0.48
CEACAM3P40198 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CEACAM3P40198 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC12.04□□□□□ -0.48
CEACAM3P40198 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC12.04□□□□□ -0.48
CEACAM3P40198 TPO-203ENST00000346956 2923 ntTSL 5 BASIC12.04□□□□□ -0.48
CEACAM3P40198 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CEACAM3P40198 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
CEACAM3P40198 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CEACAM3P40198 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
CEACAM3P40198 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CEACAM3P40198 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CEACAM3P40198 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC12.03□□□□□ -0.48
CEACAM3P40198 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
CEACAM3P40198 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CEACAM3P40198 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
CEACAM3P40198 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CEACAM3P40198 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
CEACAM3P40198 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CEACAM3P40198 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CEACAM3P40198 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC12.03□□□□□ -0.48
CEACAM3P40198 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC12.03□□□□□ -0.48
CEACAM3P40198 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
CEACAM3P40198 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
CEACAM3P40198 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CEACAM3P40198 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
CEACAM3P40198 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC12.03□□□□□ -0.48
CEACAM3P40198 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CEACAM3P40198 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
CEACAM3P40198 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CEACAM3P40198 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CEACAM3P40198 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC12.03□□□□□ -0.48
CEACAM3P40198 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC12.03□□□□□ -0.48
CEACAM3P40198 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC12.03□□□□□ -0.48
CEACAM3P40198 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CEACAM3P40198 RNA5SP412-201ENST00000516234 123 ntBASIC12.03□□□□□ -0.48
CEACAM3P40198 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CEACAM3P40198 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC12.03□□□□□ -0.48
CEACAM3P40198 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC12.03□□□□□ -0.48
CEACAM3P40198 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC12.03□□□□□ -0.48
CEACAM3P40198 DUX4L45-201ENST00000566406 1057 ntBASIC12.03□□□□□ -0.48
CEACAM3P40198 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
CEACAM3P40198 AC073413.1-201ENST00000603927 732 ntBASIC12.03□□□□□ -0.48
CEACAM3P40198 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
CEACAM3P40198 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
CEACAM3P40198 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC12.03□□□□□ -0.48
CEACAM3P40198 AC020910.5-201ENST00000623668 1865 ntBASIC12.03□□□□□ -0.48
CEACAM3P40198 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
CEACAM3P40198 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
CEACAM3P40198 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC12.03□□□□□ -0.48
CEACAM3P40198 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CEACAM3P40198 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC12.03□□□□□ -0.48
CEACAM3P40198 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CEACAM3P40198 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms