Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFC4P35249 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RFC4P35249 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC18.16■□□□□ 0.5
RFC4P35249 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFC4P35249 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
RFC4P35249 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC18.15■□□□□ 0.5
RFC4P35249 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RFC4P35249 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFC4P35249 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RFC4P35249 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RFC4P35249 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC18.15■□□□□ 0.5
RFC4P35249 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFC4P35249 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RFC4P35249 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC18.15■□□□□ 0.5
RFC4P35249 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFC4P35249 RNVU1-8-201ENST00000364272 125 ntBASIC18.15■□□□□ 0.5
RFC4P35249 SURF4-203ENST00000371991 715 ntTSL 3 BASIC18.15■□□□□ 0.5
RFC4P35249 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC18.15■□□□□ 0.5
RFC4P35249 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RFC4P35249 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFC4P35249 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFC4P35249 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC18.15■□□□□ 0.5
RFC4P35249 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RFC4P35249 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC18.15■□□□□ 0.5
RFC4P35249 AC006483.2-201ENST00000609813 515 ntBASIC18.15■□□□□ 0.5
RFC4P35249 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC18.15■□□□□ 0.5
RFC4P35249 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFC4P35249 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
RFC4P35249 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC18.15■□□□□ 0.5
RFC4P35249 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC18.15■□□□□ 0.5
RFC4P35249 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC18.15■□□□□ 0.5
RFC4P35249 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFC4P35249 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
RFC4P35249 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
RFC4P35249 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RFC4P35249 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
RFC4P35249 CELP-203ENST00000624767 2414 ntTSL 5 BASIC18.14■□□□□ 0.5
RFC4P35249 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
RFC4P35249 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC18.14■□□□□ 0.5
RFC4P35249 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RFC4P35249 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
RFC4P35249 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
RFC4P35249 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
RFC4P35249 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
RFC4P35249 MIR566-201ENST00000385187 94 ntBASIC18.14■□□□□ 0.49
RFC4P35249 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RFC4P35249 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC18.14■□□□□ 0.49
RFC4P35249 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RFC4P35249 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RFC4P35249 AC063952.3-201ENST00000467756 308 ntBASIC18.14■□□□□ 0.49
RFC4P35249 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC18.14■□□□□ 0.49
RFC4P35249 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC18.14■□□□□ 0.49
RFC4P35249 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC18.14■□□□□ 0.49
RFC4P35249 AL139339.2-201ENST00000608063 657 ntBASIC18.14■□□□□ 0.49
RFC4P35249 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
RFC4P35249 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RFC4P35249 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC18.14■□□□□ 0.49
RFC4P35249 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC18.14■□□□□ 0.49
RFC4P35249 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RFC4P35249 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
RFC4P35249 LINC00528-201ENST00000600723 2160 ntBASIC18.14■□□□□ 0.49
RFC4P35249 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
RFC4P35249 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RFC4P35249 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
RFC4P35249 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC18.14■□□□□ 0.49
RFC4P35249 AC008894.3-201ENST00000624324 3103 ntBASIC18.14■□□□□ 0.49
RFC4P35249 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RFC4P35249 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RFC4P35249 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
RFC4P35249 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RFC4P35249 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC18.13■□□□□ 0.49
RFC4P35249 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
RFC4P35249 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC18.13■□□□□ 0.49
RFC4P35249 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
RFC4P35249 AC006987.1-201ENST00000413610 527 ntBASIC18.13■□□□□ 0.49
RFC4P35249 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RFC4P35249 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC18.13■□□□□ 0.49
RFC4P35249 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC18.13■□□□□ 0.49
RFC4P35249 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC18.13■□□□□ 0.49
RFC4P35249 AC008026.2-201ENST00000495438 348 ntBASIC18.13■□□□□ 0.49
RFC4P35249 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
RFC4P35249 KRT8P2-201ENST00000556193 944 ntBASIC18.13■□□□□ 0.49
RFC4P35249 AC145285.5-201ENST00000562217 361 ntBASIC18.13■□□□□ 0.49
RFC4P35249 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RFC4P35249 DGAT2L7P-201ENST00000602462 744 ntBASIC18.13■□□□□ 0.49
RFC4P35249 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RFC4P35249 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RFC4P35249 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
RFC4P35249 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC18.13■□□□□ 0.49
RFC4P35249 AC067931.2-201ENST00000623655 2003 ntBASIC18.13■□□□□ 0.49
RFC4P35249 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC18.13■□□□□ 0.49
RFC4P35249 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
RFC4P35249 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RFC4P35249 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFC4P35249 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFC4P35249 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFC4P35249 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC18.12■□□□□ 0.49
RFC4P35249 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RFC4P35249 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC18.12■□□□□ 0.49
RFC4P35249 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms