Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
LSP1P33241 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.76□□□□□ -0.05
LSP1P33241 AC145285.3-201ENST00000564603 959 ntBASIC14.76□□□□□ -0.05
LSP1P33241 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.76□□□□□ -0.05
LSP1P33241 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
LSP1P33241 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.76□□□□□ -0.05
LSP1P33241 AC027601.4-201ENST00000611259 610 ntBASIC14.76□□□□□ -0.05
LSP1P33241 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
LSP1P33241 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
LSP1P33241 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LSP1P33241 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LSP1P33241 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LSP1P33241 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LSP1P33241 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LSP1P33241 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LSP1P33241 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
LSP1P33241 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LSP1P33241 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.76□□□□□ -0.05
LSP1P33241 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC14.76□□□□□ -0.05
LSP1P33241 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LSP1P33241 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LSP1P33241 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LSP1P33241 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LSP1P33241 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
LSP1P33241 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LSP1P33241 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LSP1P33241 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LSP1P33241 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
LSP1P33241 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LSP1P33241 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LSP1P33241 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC14.75□□□□□ -0.05
LSP1P33241 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
LSP1P33241 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
LSP1P33241 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC14.75□□□□□ -0.05
LSP1P33241 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
LSP1P33241 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
LSP1P33241 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC14.75□□□□□ -0.05
LSP1P33241 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LSP1P33241 AL359845.1-201ENST00000458202 1648 ntBASIC14.75□□□□□ -0.05
LSP1P33241 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC14.75□□□□□ -0.05
LSP1P33241 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC14.75□□□□□ -0.05
LSP1P33241 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LSP1P33241 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.75□□□□□ -0.05
LSP1P33241 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LSP1P33241 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LSP1P33241 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LSP1P33241 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
LSP1P33241 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.75□□□□□ -0.05
LSP1P33241 TOMM22P5-201ENST00000416399 439 ntBASIC14.75□□□□□ -0.05
LSP1P33241 MED15P5-201ENST00000423150 992 ntBASIC14.75□□□□□ -0.05
LSP1P33241 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.75□□□□□ -0.05
LSP1P33241 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.75□□□□□ -0.05
LSP1P33241 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.75□□□□□ -0.05
LSP1P33241 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.75□□□□□ -0.05
LSP1P33241 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.75□□□□□ -0.05
LSP1P33241 AC026150.2-201ENST00000564693 1156 ntBASIC14.75□□□□□ -0.05
LSP1P33241 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.75□□□□□ -0.05
LSP1P33241 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.75□□□□□ -0.05
LSP1P33241 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.75□□□□□ -0.05
LSP1P33241 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
LSP1P33241 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.75□□□□□ -0.05
LSP1P33241 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC14.75□□□□□ -0.05
LSP1P33241 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC14.75□□□□□ -0.05
LSP1P33241 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LSP1P33241 AC010970.1-201ENST00000445125 1848 ntBASIC14.75□□□□□ -0.05
LSP1P33241 AC026271.4-201ENST00000578214 1833 ntBASIC14.75□□□□□ -0.05
LSP1P33241 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
LSP1P33241 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
LSP1P33241 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
LSP1P33241 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LSP1P33241 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LSP1P33241 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC14.75□□□□□ -0.05
LSP1P33241 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LSP1P33241 AP001972.5-201ENST00000624624 2338 ntBASIC14.75□□□□□ -0.05
LSP1P33241 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LSP1P33241 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
LSP1P33241 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LSP1P33241 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LSP1P33241 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
LSP1P33241 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
LSP1P33241 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC14.74□□□□□ -0.05
LSP1P33241 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LSP1P33241 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
LSP1P33241 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LSP1P33241 AL136172.1-201ENST00000598590 1394 ntBASIC14.74□□□□□ -0.05
LSP1P33241 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC14.74□□□□□ -0.05
LSP1P33241 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LSP1P33241 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LSP1P33241 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC14.74□□□□□ -0.05
LSP1P33241 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
LSP1P33241 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC14.74□□□□□ -0.05
LSP1P33241 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
LSP1P33241 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LSP1P33241 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC14.74□□□□□ -0.05
LSP1P33241 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC14.74□□□□□ -0.05
LSP1P33241 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LSP1P33241 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
LSP1P33241 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LSP1P33241 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LSP1P33241 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms