Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC12.5□□□□□ -0.41
VAMP1P23763 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC12.5□□□□□ -0.41
VAMP1P23763 SSH2-211ENST00000590153 570 ntTSL 4 BASIC12.5□□□□□ -0.41
VAMP1P23763 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC12.5□□□□□ -0.41
VAMP1P23763 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VAMP1P23763 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
VAMP1P23763 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC12.5□□□□□ -0.41
VAMP1P23763 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC12.5□□□□□ -0.41
VAMP1P23763 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC12.5□□□□□ -0.41
VAMP1P23763 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
VAMP1P23763 TP73-209ENST00000603362 1668 ntTSL 5 BASIC12.5□□□□□ -0.41
VAMP1P23763 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC12.5□□□□□ -0.41
VAMP1P23763 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
VAMP1P23763 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC12.5□□□□□ -0.41
VAMP1P23763 MRVI1-202ENST00000424001 5815 ntTSL 5 BASIC12.5□□□□□ -0.41
VAMP1P23763 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VAMP1P23763 RPL32P3-206ENST00000510078 2161 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VAMP1P23763 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
VAMP1P23763 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VAMP1P23763 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VAMP1P23763 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
VAMP1P23763 KRT42P-202ENST00000438131 2895 ntTSL 2 BASIC12.5□□□□□ -0.41
VAMP1P23763 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
VAMP1P23763 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC12.5□□□□□ -0.41
VAMP1P23763 AL118506.1-201ENST00000601296 3082 ntBASIC12.5□□□□□ -0.41
VAMP1P23763 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
VAMP1P23763 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
VAMP1P23763 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
VAMP1P23763 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC12.49□□□□□ -0.41
VAMP1P23763 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC12.49□□□□□ -0.41
VAMP1P23763 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VAMP1P23763 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VAMP1P23763 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VAMP1P23763 CACNA1G-218ENST00000507510 7014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
VAMP1P23763 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VAMP1P23763 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VAMP1P23763 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC12.49□□□□□ -0.41
VAMP1P23763 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
VAMP1P23763 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VAMP1P23763 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VAMP1P23763 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VAMP1P23763 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC12.49□□□□□ -0.41
VAMP1P23763 AL121723.1-201ENST00000445194 1519 ntBASIC12.49□□□□□ -0.41
VAMP1P23763 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC12.49□□□□□ -0.41
VAMP1P23763 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
VAMP1P23763 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC12.49□□□□□ -0.41
VAMP1P23763 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC12.49□□□□□ -0.41
VAMP1P23763 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
VAMP1P23763 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VAMP1P23763 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VAMP1P23763 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
VAMP1P23763 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC12.49□□□□□ -0.41
VAMP1P23763 PPIE-208ENST00000470213 927 ntTSL 3 BASIC12.49□□□□□ -0.41
VAMP1P23763 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC12.49□□□□□ -0.41
VAMP1P23763 NAA50-208ENST00000497255 789 ntTSL 5 BASIC12.49□□□□□ -0.41
VAMP1P23763 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
VAMP1P23763 LINC01225-203ENST00000563550 1244 ntBASIC12.49□□□□□ -0.41
VAMP1P23763 AC079414.2-201ENST00000567157 1104 ntBASIC12.49□□□□□ -0.41
VAMP1P23763 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC12.49□□□□□ -0.41
VAMP1P23763 AP001005.1-201ENST00000571755 1248 ntBASIC12.49□□□□□ -0.41
VAMP1P23763 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
VAMP1P23763 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC12.49□□□□□ -0.41
VAMP1P23763 AL445228.2-201ENST00000605589 952 ntBASIC12.49□□□□□ -0.41
VAMP1P23763 AC026120.1-201ENST00000611536 926 ntBASIC12.49□□□□□ -0.41
VAMP1P23763 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
VAMP1P23763 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VAMP1P23763 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
VAMP1P23763 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VAMP1P23763 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VAMP1P23763 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
VAMP1P23763 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VAMP1P23763 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VAMP1P23763 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VAMP1P23763 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VAMP1P23763 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VAMP1P23763 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VAMP1P23763 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
VAMP1P23763 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC12.49□□□□□ -0.41
VAMP1P23763 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC12.49□□□□□ -0.41
VAMP1P23763 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VAMP1P23763 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VAMP1P23763 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VAMP1P23763 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC12.48□□□□□ -0.41
VAMP1P23763 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VAMP1P23763 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VAMP1P23763 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
VAMP1P23763 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
VAMP1P23763 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VAMP1P23763 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VAMP1P23763 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
VAMP1P23763 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VAMP1P23763 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
VAMP1P23763 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC12.48□□□□□ -0.41
VAMP1P23763 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC12.48□□□□□ -0.41
VAMP1P23763 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VAMP1P23763 AC104109.2-201ENST00000602919 1418 ntBASIC12.48□□□□□ -0.41
VAMP1P23763 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VAMP1P23763 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VAMP1P23763 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC12.48□□□□□ -0.41
VAMP1P23763 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 129.6 ms