Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC14.83□□□□□ -0.04
HLA-DPA1P20036 CICP12-201ENST00000455801 843 ntBASIC14.83□□□□□ -0.04
HLA-DPA1P20036 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC14.83□□□□□ -0.04
HLA-DPA1P20036 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC14.83□□□□□ -0.04
HLA-DPA1P20036 SORD2P-201ENST00000558556 1069 ntBASIC14.83□□□□□ -0.04
HLA-DPA1P20036 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
HLA-DPA1P20036 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.83□□□□□ -0.04
HLA-DPA1P20036 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DPA1P20036 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DPA1P20036 AL359881.2-201ENST00000602973 570 ntBASIC14.83□□□□□ -0.04
HLA-DPA1P20036 MIR6775-201ENST00000617557 69 ntBASIC14.83□□□□□ -0.04
HLA-DPA1P20036 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.83□□□□□ -0.04
HLA-DPA1P20036 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
HLA-DPA1P20036 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DPA1P20036 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DPA1P20036 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DPA1P20036 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.83□□□□□ -0.04
HLA-DPA1P20036 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.83□□□□□ -0.04
HLA-DPA1P20036 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
HLA-DPA1P20036 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DPA1P20036 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DPA1P20036 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DPA1P20036 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DPA1P20036 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
HLA-DPA1P20036 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
HLA-DPA1P20036 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.83□□□□□ -0.04
HLA-DPA1P20036 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DPA1P20036 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.83□□□□□ -0.04
HLA-DPA1P20036 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DPA1P20036 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.83□□□□□ -0.04
HLA-DPA1P20036 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
HLA-DPA1P20036 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
HLA-DPA1P20036 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
HLA-DPA1P20036 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.82□□□□□ -0.04
HLA-DPA1P20036 HSPA7-201ENST00000445535 1927 ntBASIC14.82□□□□□ -0.04
HLA-DPA1P20036 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.82□□□□□ -0.04
HLA-DPA1P20036 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.82□□□□□ -0.04
HLA-DPA1P20036 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DPA1P20036 AC152010.1-201ENST00000415779 2006 ntBASIC14.82□□□□□ -0.04
HLA-DPA1P20036 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DPA1P20036 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DPA1P20036 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC14.82□□□□□ -0.04
HLA-DPA1P20036 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DPA1P20036 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.82□□□□□ -0.04
HLA-DPA1P20036 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DPA1P20036 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DPA1P20036 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
HLA-DPA1P20036 MIR658-201ENST00000385210 100 ntBASIC14.82□□□□□ -0.04
HLA-DPA1P20036 STX1A-203ENST00000395155 783 ntTSL 2 BASIC14.82□□□□□ -0.04
HLA-DPA1P20036 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC14.82□□□□□ -0.04
HLA-DPA1P20036 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
HLA-DPA1P20036 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
HLA-DPA1P20036 AC022210.1-201ENST00000449856 793 ntBASIC14.82□□□□□ -0.04
HLA-DPA1P20036 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DPA1P20036 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC14.82□□□□□ -0.04
HLA-DPA1P20036 HNRNPA1P48-202ENST00000565308 961 ntBASIC14.82□□□□□ -0.04
HLA-DPA1P20036 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DPA1P20036 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC14.82□□□□□ -0.04
HLA-DPA1P20036 AL008721.1-201ENST00000609964 604 ntBASIC14.82□□□□□ -0.04
HLA-DPA1P20036 AC133552.6-201ENST00000613406 534 ntBASIC14.82□□□□□ -0.04
HLA-DPA1P20036 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.82□□□□□ -0.04
HLA-DPA1P20036 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DPA1P20036 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DPA1P20036 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
HLA-DPA1P20036 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DPA1P20036 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DPA1P20036 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DPA1P20036 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DPA1P20036 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.82□□□□□ -0.04
HLA-DPA1P20036 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DPA1P20036 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC14.82□□□□□ -0.04
HLA-DPA1P20036 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DPA1P20036 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC14.82□□□□□ -0.04
HLA-DPA1P20036 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DPA1P20036 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
HLA-DPA1P20036 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
HLA-DPA1P20036 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.82□□□□□ -0.04
HLA-DPA1P20036 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC14.82□□□□□ -0.04
HLA-DPA1P20036 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DPA1P20036 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DPA1P20036 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DPA1P20036 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DPA1P20036 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
HLA-DPA1P20036 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DPA1P20036 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DPA1P20036 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DPA1P20036 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DPA1P20036 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DPA1P20036 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.81□□□□□ -0.04
HLA-DPA1P20036 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DPA1P20036 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DPA1P20036 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DPA1P20036 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DPA1P20036 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DPA1P20036 MIR326-201ENST00000362220 95 ntBASIC14.81□□□□□ -0.04
HLA-DPA1P20036 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DPA1P20036 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC14.81□□□□□ -0.04
HLA-DPA1P20036 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC14.81□□□□□ -0.04
HLA-DPA1P20036 AC079178.1-201ENST00000420915 656 ntBASIC14.81□□□□□ -0.04
HLA-DPA1P20036 HLA-V-201ENST00000429037 534 ntBASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms