Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ERCC3P19447 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ERCC3P19447 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ERCC3P19447 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ERCC3P19447 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC17.01■□□□□ 0.31
ERCC3P19447 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ERCC3P19447 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC17.01■□□□□ 0.31
ERCC3P19447 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ERCC3P19447 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
ERCC3P19447 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ERCC3P19447 TLE1P1-201ENST00000422965 589 ntBASIC17.01■□□□□ 0.31
ERCC3P19447 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC17.01■□□□□ 0.31
ERCC3P19447 AC253536.4-201ENST00000440539 267 ntBASIC17.01■□□□□ 0.31
ERCC3P19447 LDHBP1-201ENST00000455730 1119 ntBASIC17.01■□□□□ 0.31
ERCC3P19447 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC17.01■□□□□ 0.31
ERCC3P19447 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC17.01■□□□□ 0.31
ERCC3P19447 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC17.01■□□□□ 0.31
ERCC3P19447 IGLV3-15-201ENST00000518356 244 ntBASIC17.01■□□□□ 0.31
ERCC3P19447 FADS2-212ENST00000522639 360 ntTSL 5 BASIC17.01■□□□□ 0.31
ERCC3P19447 FADS2-215ENST00000574708 385 ntTSL 3 BASIC17.01■□□□□ 0.31
ERCC3P19447 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC17.01■□□□□ 0.31
ERCC3P19447 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC17.01■□□□□ 0.31
ERCC3P19447 MIR7845-201ENST00000618396 99 ntBASIC17.01■□□□□ 0.31
ERCC3P19447 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ERCC3P19447 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC17.01■□□□□ 0.31
ERCC3P19447 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC17.01■□□□□ 0.31
ERCC3P19447 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
ERCC3P19447 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
ERCC3P19447 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
ERCC3P19447 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ERCC3P19447 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ERCC3P19447 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ERCC3P19447 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ERCC3P19447 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ERCC3P19447 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ERCC3P19447 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ERCC3P19447 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ERCC3P19447 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
ERCC3P19447 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ERCC3P19447 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
ERCC3P19447 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
ERCC3P19447 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ERCC3P19447 R3HDM2P2-201ENST00000401880 2116 ntBASIC17■□□□□ 0.31
ERCC3P19447 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC17■□□□□ 0.31
ERCC3P19447 AC092978.1-202ENST00000637590 1327 ntBASIC17■□□□□ 0.31
ERCC3P19447 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC17■□□□□ 0.31
ERCC3P19447 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ERCC3P19447 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ERCC3P19447 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
ERCC3P19447 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
ERCC3P19447 SALL4P5-201ENST00000419001 1760 ntBASIC17■□□□□ 0.31
ERCC3P19447 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC17■□□□□ 0.31
ERCC3P19447 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ERCC3P19447 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
ERCC3P19447 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ERCC3P19447 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ERCC3P19447 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
ERCC3P19447 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ERCC3P19447 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ERCC3P19447 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC17■□□□□ 0.31
ERCC3P19447 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC17■□□□□ 0.31
ERCC3P19447 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC17■□□□□ 0.31
ERCC3P19447 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC17■□□□□ 0.31
ERCC3P19447 CICP12-201ENST00000455801 843 ntBASIC17■□□□□ 0.31
ERCC3P19447 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC17■□□□□ 0.31
ERCC3P19447 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC17■□□□□ 0.31
ERCC3P19447 ALG3P1-201ENST00000508806 1114 ntBASIC17■□□□□ 0.31
ERCC3P19447 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC17■□□□□ 0.31
ERCC3P19447 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
ERCC3P19447 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC17■□□□□ 0.31
ERCC3P19447 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC17■□□□□ 0.31
ERCC3P19447 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC17■□□□□ 0.31
ERCC3P19447 MIR4754-201ENST00000582477 89 ntBASIC17■□□□□ 0.31
ERCC3P19447 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC17■□□□□ 0.31
ERCC3P19447 IRF3-215ENST00000596822 823 ntTSL 3 BASIC17■□□□□ 0.31
ERCC3P19447 AC018635.2-201ENST00000608625 364 ntBASIC17■□□□□ 0.31
ERCC3P19447 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ERCC3P19447 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ERCC3P19447 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
ERCC3P19447 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ERCC3P19447 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC17■□□□□ 0.31
ERCC3P19447 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC17■□□□□ 0.31
ERCC3P19447 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ERCC3P19447 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC17■□□□□ 0.31
ERCC3P19447 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ERCC3P19447 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC17■□□□□ 0.31
ERCC3P19447 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC17■□□□□ 0.31
ERCC3P19447 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ERCC3P19447 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC16.99■□□□□ 0.31
ERCC3P19447 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ERCC3P19447 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
ERCC3P19447 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.99■□□□□ 0.31
ERCC3P19447 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
ERCC3P19447 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
ERCC3P19447 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ERCC3P19447 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ERCC3P19447 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
ERCC3P19447 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ERCC3P19447 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ERCC3P19447 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms