Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
VCLP18206 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
VCLP18206 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
VCLP18206 MPV17-205ENST00000402310 906 ntTSL 5 BASIC14.85□□□□□ -0.03
VCLP18206 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC14.85□□□□□ -0.03
VCLP18206 FAM21FP-201ENST00000426241 1131 ntBASIC14.85□□□□□ -0.03
VCLP18206 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
VCLP18206 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC14.85□□□□□ -0.03
VCLP18206 YBX1P6-201ENST00000442962 1002 ntBASIC14.85□□□□□ -0.03
VCLP18206 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
VCLP18206 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC14.85□□□□□ -0.03
VCLP18206 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC14.85□□□□□ -0.03
VCLP18206 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC14.85□□□□□ -0.03
VCLP18206 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC14.85□□□□□ -0.03
VCLP18206 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC14.85□□□□□ -0.03
VCLP18206 SNX29P1-201ENST00000548357 1007 ntBASIC14.85□□□□□ -0.03
VCLP18206 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VCLP18206 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC14.85□□□□□ -0.03
VCLP18206 AC006453.4-201ENST00000636949 1252 ntBASIC14.85□□□□□ -0.03
VCLP18206 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VCLP18206 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
VCLP18206 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.85□□□□□ -0.03
VCLP18206 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.85□□□□□ -0.03
VCLP18206 AL354989.2-201ENST00000435838 1540 ntBASIC14.85□□□□□ -0.03
VCLP18206 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.85□□□□□ -0.03
VCLP18206 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.85□□□□□ -0.03
VCLP18206 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VCLP18206 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
VCLP18206 AHCYP2-201ENST00000430630 1300 ntBASIC14.85□□□□□ -0.03
VCLP18206 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
VCLP18206 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VCLP18206 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
VCLP18206 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.85□□□□□ -0.03
VCLP18206 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.85□□□□□ -0.03
VCLP18206 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
VCLP18206 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VCLP18206 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC14.85□□□□□ -0.03
VCLP18206 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
VCLP18206 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.85□□□□□ -0.03
VCLP18206 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VCLP18206 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
VCLP18206 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VCLP18206 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VCLP18206 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
VCLP18206 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.84□□□□□ -0.03
VCLP18206 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
VCLP18206 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VCLP18206 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.84□□□□□ -0.03
VCLP18206 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
VCLP18206 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
VCLP18206 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VCLP18206 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
VCLP18206 AC138969.2-201ENST00000532739 9932 ntBASIC14.84□□□□□ -0.03
VCLP18206 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
VCLP18206 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
VCLP18206 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VCLP18206 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
VCLP18206 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VCLP18206 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
VCLP18206 AC006001.1-201ENST00000325130 474 ntBASIC14.84□□□□□ -0.03
VCLP18206 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.84□□□□□ -0.03
VCLP18206 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.84□□□□□ -0.03
VCLP18206 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
VCLP18206 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
VCLP18206 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VCLP18206 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC14.84□□□□□ -0.03
VCLP18206 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
VCLP18206 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VCLP18206 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC14.84□□□□□ -0.03
VCLP18206 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC14.84□□□□□ -0.03
VCLP18206 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
VCLP18206 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
VCLP18206 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VCLP18206 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
VCLP18206 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VCLP18206 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VCLP18206 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VCLP18206 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VCLP18206 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VCLP18206 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC14.84□□□□□ -0.03
VCLP18206 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
VCLP18206 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC14.84□□□□□ -0.03
VCLP18206 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC14.84□□□□□ -0.03
VCLP18206 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
VCLP18206 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
VCLP18206 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
VCLP18206 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
VCLP18206 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
VCLP18206 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.03
VCLP18206 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
VCLP18206 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
VCLP18206 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
VCLP18206 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
VCLP18206 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.83□□□□□ -0.04
VCLP18206 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VCLP18206 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
VCLP18206 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VCLP18206 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC14.83□□□□□ -0.04
VCLP18206 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
VCLP18206 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms