Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NCK1P16333 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC13.92□□□□□ -0.18
NCK1P16333 MRPL37P1-201ENST00000592451 1337 ntBASIC13.92□□□□□ -0.18
NCK1P16333 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
NCK1P16333 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NCK1P16333 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NCK1P16333 AC100757.3-201ENST00000622361 1406 ntBASIC13.92□□□□□ -0.18
NCK1P16333 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NCK1P16333 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.92□□□□□ -0.18
NCK1P16333 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC13.92□□□□□ -0.18
NCK1P16333 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NCK1P16333 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NCK1P16333 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
NCK1P16333 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
NCK1P16333 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NCK1P16333 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NCK1P16333 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
NCK1P16333 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NCK1P16333 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.92□□□□□ -0.18
NCK1P16333 CNN2P2-201ENST00000443536 909 ntBASIC13.92□□□□□ -0.18
NCK1P16333 CNN2P3-201ENST00000450201 906 ntBASIC13.92□□□□□ -0.18
NCK1P16333 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NCK1P16333 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC13.92□□□□□ -0.18
NCK1P16333 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC13.92□□□□□ -0.18
NCK1P16333 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC13.92□□□□□ -0.18
NCK1P16333 HLA-J-203ENST00000494367 1087 ntBASIC13.92□□□□□ -0.18
NCK1P16333 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC13.92□□□□□ -0.18
NCK1P16333 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NCK1P16333 AC138761.1-201ENST00000584393 385 ntBASIC13.92□□□□□ -0.18
NCK1P16333 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC13.92□□□□□ -0.18
NCK1P16333 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NCK1P16333 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC13.92□□□□□ -0.18
NCK1P16333 MIR6074-201ENST00000612054 107 ntBASIC13.92□□□□□ -0.18
NCK1P16333 AL136317.3-201ENST00000618497 906 ntBASIC13.92□□□□□ -0.18
NCK1P16333 BX539320.1-201ENST00000623759 877 ntBASIC13.92□□□□□ -0.18
NCK1P16333 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.92□□□□□ -0.18
NCK1P16333 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.92□□□□□ -0.18
NCK1P16333 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
NCK1P16333 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NCK1P16333 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC13.92□□□□□ -0.18
NCK1P16333 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
NCK1P16333 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NCK1P16333 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NCK1P16333 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NCK1P16333 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC13.92□□□□□ -0.18
NCK1P16333 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC13.92□□□□□ -0.18
NCK1P16333 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC13.92□□□□□ -0.18
NCK1P16333 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NCK1P16333 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NCK1P16333 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC13.92□□□□□ -0.18
NCK1P16333 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
NCK1P16333 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.91□□□□□ -0.18
NCK1P16333 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC13.91□□□□□ -0.18
NCK1P16333 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.91□□□□□ -0.18
NCK1P16333 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
NCK1P16333 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NCK1P16333 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NCK1P16333 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NCK1P16333 STK3-218ENST00000617590 2485 ntTSL 5 BASIC13.91□□□□□ -0.18
NCK1P16333 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NCK1P16333 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NCK1P16333 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
NCK1P16333 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
NCK1P16333 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NCK1P16333 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NCK1P16333 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NCK1P16333 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NCK1P16333 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NCK1P16333 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NCK1P16333 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC13.91□□□□□ -0.18
NCK1P16333 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NCK1P16333 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NCK1P16333 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC13.91□□□□□ -0.18
NCK1P16333 RNU1-114P-201ENST00000365297 166 ntBASIC13.91□□□□□ -0.18
NCK1P16333 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NCK1P16333 BAD-202ENST00000394531 631 ntTSL 3 BASIC13.91□□□□□ -0.18
NCK1P16333 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC13.91□□□□□ -0.18
NCK1P16333 AC254562.1-201ENST00000417586 456 ntBASIC13.91□□□□□ -0.18
NCK1P16333 UPF3AP3-201ENST00000420996 769 ntBASIC13.91□□□□□ -0.18
NCK1P16333 NUS1P3-201ENST00000423502 862 ntBASIC13.91□□□□□ -0.18
NCK1P16333 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
NCK1P16333 KLF2P3-201ENST00000451977 1087 ntBASIC13.91□□□□□ -0.18
NCK1P16333 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.91□□□□□ -0.18
NCK1P16333 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.91□□□□□ -0.18
NCK1P16333 AC022616.1-201ENST00000518688 554 ntBASIC13.91□□□□□ -0.18
NCK1P16333 DHDH-204ENST00000523250 634 ntTSL 5 BASIC13.91□□□□□ -0.18
NCK1P16333 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC13.91□□□□□ -0.18
NCK1P16333 BAD-207ENST00000544785 525 ntTSL 3 BASIC13.91□□□□□ -0.18
NCK1P16333 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.91□□□□□ -0.18
NCK1P16333 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NCK1P16333 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC13.91□□□□□ -0.18
NCK1P16333 AC036164.1-201ENST00000570544 333 ntBASIC13.91□□□□□ -0.18
NCK1P16333 SPDYE22P-201ENST00000582158 798 ntBASIC13.91□□□□□ -0.18
NCK1P16333 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC13.91□□□□□ -0.18
NCK1P16333 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.91□□□□□ -0.18
NCK1P16333 AL445209.1-201ENST00000607269 3491 ntBASIC13.91□□□□□ -0.18
NCK1P16333 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NCK1P16333 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NCK1P16333 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
NCK1P16333 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms