Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC12.04□□□□□ -0.48
DEFA4P12838 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC12.04□□□□□ -0.48
DEFA4P12838 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
DEFA4P12838 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC12.03□□□□□ -0.48
DEFA4P12838 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
DEFA4P12838 AL138799.1-201ENST00000448213 1675 ntBASIC12.03□□□□□ -0.48
DEFA4P12838 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
DEFA4P12838 AC015802.1-201ENST00000588104 1449 ntBASIC12.03□□□□□ -0.48
DEFA4P12838 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
DEFA4P12838 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
DEFA4P12838 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
DEFA4P12838 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC12.03□□□□□ -0.48
DEFA4P12838 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
DEFA4P12838 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC12.03□□□□□ -0.48
DEFA4P12838 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
DEFA4P12838 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
DEFA4P12838 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
DEFA4P12838 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
DEFA4P12838 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
DEFA4P12838 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC12.03□□□□□ -0.48
DEFA4P12838 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
DEFA4P12838 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC12.03□□□□□ -0.48
DEFA4P12838 AC019294.4-201ENST00000561777 2905 ntBASIC12.03□□□□□ -0.48
DEFA4P12838 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
DEFA4P12838 CDH11-201ENST00000268603 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
DEFA4P12838 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
DEFA4P12838 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
DEFA4P12838 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC12.03□□□□□ -0.48
DEFA4P12838 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
DEFA4P12838 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
DEFA4P12838 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC12.03□□□□□ -0.48
DEFA4P12838 NUS1P3-201ENST00000423502 862 ntBASIC12.03□□□□□ -0.48
DEFA4P12838 AC134915.1-201ENST00000426461 574 ntBASIC12.03□□□□□ -0.48
DEFA4P12838 VDAC1P7-201ENST00000462417 847 ntBASIC12.03□□□□□ -0.48
DEFA4P12838 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC12.03□□□□□ -0.48
DEFA4P12838 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
DEFA4P12838 CD81-207ENST00000481687 890 ntTSL 2 BASIC12.03□□□□□ -0.48
DEFA4P12838 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
DEFA4P12838 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC12.03□□□□□ -0.48
DEFA4P12838 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC12.03□□□□□ -0.48
DEFA4P12838 AC055876.2-201ENST00000531834 546 ntBASIC12.03□□□□□ -0.48
DEFA4P12838 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
DEFA4P12838 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC12.03□□□□□ -0.48
DEFA4P12838 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
DEFA4P12838 ARL16-202ENST00000570561 768 ntTSL 2 BASIC12.03□□□□□ -0.48
DEFA4P12838 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
DEFA4P12838 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
DEFA4P12838 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC12.03□□□□□ -0.48
DEFA4P12838 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
DEFA4P12838 AC107373.2-201ENST00000607735 490 ntBASIC12.03□□□□□ -0.48
DEFA4P12838 AC004233.3-201ENST00000607794 1269 ntBASIC12.03□□□□□ -0.48
DEFA4P12838 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
DEFA4P12838 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
DEFA4P12838 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
DEFA4P12838 AL360270.3-201ENST00000609118 1348 ntBASIC12.03□□□□□ -0.48
DEFA4P12838 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC12.03□□□□□ -0.48
DEFA4P12838 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
DEFA4P12838 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
DEFA4P12838 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
DEFA4P12838 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
DEFA4P12838 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
DEFA4P12838 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
DEFA4P12838 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
DEFA4P12838 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
DEFA4P12838 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC12.03□□□□□ -0.48
DEFA4P12838 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
DEFA4P12838 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC12.03□□□□□ -0.48
DEFA4P12838 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
DEFA4P12838 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
DEFA4P12838 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC12.03□□□□□ -0.48
DEFA4P12838 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
DEFA4P12838 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
DEFA4P12838 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC12.02□□□□□ -0.48
DEFA4P12838 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
DEFA4P12838 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
DEFA4P12838 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
DEFA4P12838 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
DEFA4P12838 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
DEFA4P12838 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
DEFA4P12838 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
DEFA4P12838 GALC-206ENST00000544807 2528 ntTSL 2 BASIC12.02□□□□□ -0.48
DEFA4P12838 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
DEFA4P12838 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
DEFA4P12838 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
DEFA4P12838 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
DEFA4P12838 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC12.02□□□□□ -0.49
DEFA4P12838 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
DEFA4P12838 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
DEFA4P12838 AL158070.2-201ENST00000623713 1621 ntBASIC12.02□□□□□ -0.49
DEFA4P12838 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
DEFA4P12838 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
DEFA4P12838 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
DEFA4P12838 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
DEFA4P12838 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
DEFA4P12838 AL645937.2-201ENST00000396808 931 ntBASIC12.02□□□□□ -0.49
DEFA4P12838 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC12.02□□□□□ -0.49
DEFA4P12838 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC12.02□□□□□ -0.49
DEFA4P12838 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC12.02□□□□□ -0.49
DEFA4P12838 RHOA-206ENST00000454011 889 ntTSL 2 BASIC12.02□□□□□ -0.49
DEFA4P12838 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC12.02□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms