Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC19.22■□□□□ 0.67
CSB-PGBD3P0DP91 RGS5-216ENST00000449680 788 ntTSL 3 BASIC19.22■□□□□ 0.67
CSB-PGBD3P0DP91 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC19.22■□□□□ 0.67
CSB-PGBD3P0DP91 AGPAT5P1-201ENST00000455855 1019 ntBASIC19.22■□□□□ 0.67
CSB-PGBD3P0DP91 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC19.22■□□□□ 0.67
CSB-PGBD3P0DP91 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC19.22■□□□□ 0.67
CSB-PGBD3P0DP91 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CSB-PGBD3P0DP91 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSB-PGBD3P0DP91 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC19.22■□□□□ 0.67
CSB-PGBD3P0DP91 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSB-PGBD3P0DP91 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSB-PGBD3P0DP91 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSB-PGBD3P0DP91 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CSB-PGBD3P0DP91 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSB-PGBD3P0DP91 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSB-PGBD3P0DP91 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSB-PGBD3P0DP91 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CSB-PGBD3P0DP91 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CSB-PGBD3P0DP91 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CSB-PGBD3P0DP91 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC19.22■□□□□ 0.67
CSB-PGBD3P0DP91 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CSB-PGBD3P0DP91 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CSB-PGBD3P0DP91 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CSB-PGBD3P0DP91 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC19.21■□□□□ 0.67
CSB-PGBD3P0DP91 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CSB-PGBD3P0DP91 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CSB-PGBD3P0DP91 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC19.21■□□□□ 0.67
CSB-PGBD3P0DP91 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC19.21■□□□□ 0.67
CSB-PGBD3P0DP91 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CSB-PGBD3P0DP91 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CSB-PGBD3P0DP91 ACE3P-201ENST00000423435 1973 ntBASIC19.21■□□□□ 0.67
CSB-PGBD3P0DP91 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CSB-PGBD3P0DP91 SAT1-201ENST00000379251 801 ntTSL 2 BASIC19.21■□□□□ 0.67
CSB-PGBD3P0DP91 SAT1-202ENST00000379253 909 ntTSL 2 BASIC19.21■□□□□ 0.67
CSB-PGBD3P0DP91 SAT1-203ENST00000379254 868 ntTSL 3 BASIC19.21■□□□□ 0.67
CSB-PGBD3P0DP91 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CSB-PGBD3P0DP91 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CSB-PGBD3P0DP91 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC19.21■□□□□ 0.67
CSB-PGBD3P0DP91 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CSB-PGBD3P0DP91 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC19.21■□□□□ 0.67
CSB-PGBD3P0DP91 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
CSB-PGBD3P0DP91 DNM1P51-201ENST00000558149 522 ntBASIC19.21■□□□□ 0.67
CSB-PGBD3P0DP91 ELP5-212ENST00000574255 671 ntTSL 2 BASIC19.21■□□□□ 0.67
CSB-PGBD3P0DP91 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC19.21■□□□□ 0.67
CSB-PGBD3P0DP91 HKR1-225ENST00000592168 566 ntTSL 4 BASIC19.21■□□□□ 0.67
CSB-PGBD3P0DP91 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC19.21■□□□□ 0.67
CSB-PGBD3P0DP91 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CSB-PGBD3P0DP91 AC002044.2-201ENST00000624910 970 ntBASIC19.21■□□□□ 0.67
CSB-PGBD3P0DP91 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CSB-PGBD3P0DP91 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CSB-PGBD3P0DP91 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CSB-PGBD3P0DP91 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC19.21■□□□□ 0.67
CSB-PGBD3P0DP91 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CSB-PGBD3P0DP91 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CSB-PGBD3P0DP91 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CSB-PGBD3P0DP91 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CSB-PGBD3P0DP91 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CSB-PGBD3P0DP91 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CSB-PGBD3P0DP91 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CSB-PGBD3P0DP91 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC19.21■□□□□ 0.67
CSB-PGBD3P0DP91 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CSB-PGBD3P0DP91 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.66
CSB-PGBD3P0DP91 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC19.21■□□□□ 0.66
CSB-PGBD3P0DP91 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CSB-PGBD3P0DP91 AC021305.1-201ENST00000520656 1514 ntBASIC19.2■□□□□ 0.66
CSB-PGBD3P0DP91 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CSB-PGBD3P0DP91 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CSB-PGBD3P0DP91 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC19.2■□□□□ 0.66
CSB-PGBD3P0DP91 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CSB-PGBD3P0DP91 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CSB-PGBD3P0DP91 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CSB-PGBD3P0DP91 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
CSB-PGBD3P0DP91 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CSB-PGBD3P0DP91 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
CSB-PGBD3P0DP91 PYY2-201ENST00000315776 282 ntBASIC19.2■□□□□ 0.66
CSB-PGBD3P0DP91 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CSB-PGBD3P0DP91 LCK-206ENST00000373564 2137 ntTSL 5 BASIC19.2■□□□□ 0.66
CSB-PGBD3P0DP91 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CSB-PGBD3P0DP91 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC19.2■□□□□ 0.66
CSB-PGBD3P0DP91 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC19.2■□□□□ 0.66
CSB-PGBD3P0DP91 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CSB-PGBD3P0DP91 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CSB-PGBD3P0DP91 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CSB-PGBD3P0DP91 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CSB-PGBD3P0DP91 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CSB-PGBD3P0DP91 AC021016.3-201ENST00000608367 477 ntBASIC19.2■□□□□ 0.66
CSB-PGBD3P0DP91 ETV2-207ENST00000619399 994 ntTSL 5 BASIC19.2■□□□□ 0.66
CSB-PGBD3P0DP91 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CSB-PGBD3P0DP91 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CSB-PGBD3P0DP91 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CSB-PGBD3P0DP91 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CSB-PGBD3P0DP91 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CSB-PGBD3P0DP91 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CSB-PGBD3P0DP91 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CSB-PGBD3P0DP91 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
CSB-PGBD3P0DP91 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CSB-PGBD3P0DP91 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC19.2■□□□□ 0.66
CSB-PGBD3P0DP91 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
CSB-PGBD3P0DP91 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC19.2■□□□□ 0.66
CSB-PGBD3P0DP91 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms