Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
LINGO3P0C6S8 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINGO3P0C6S8 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINGO3P0C6S8 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINGO3P0C6S8 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINGO3P0C6S8 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LINGO3P0C6S8 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LINGO3P0C6S8 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINGO3P0C6S8 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LINGO3P0C6S8 AOC4P-203ENST00000566825 2289 ntBASIC14.29□□□□□ -0.12
LINGO3P0C6S8 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINGO3P0C6S8 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC14.28□□□□□ -0.12
LINGO3P0C6S8 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINGO3P0C6S8 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINGO3P0C6S8 CDHR5-202ENST00000358353 3635 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
LINGO3P0C6S8 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LINGO3P0C6S8 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINGO3P0C6S8 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINGO3P0C6S8 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LINGO3P0C6S8 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LINGO3P0C6S8 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
LINGO3P0C6S8 ZFYVE27-201ENST00000337540 2927 ntTSL 2 BASIC14.28□□□□□ -0.12
LINGO3P0C6S8 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.28□□□□□ -0.12
LINGO3P0C6S8 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.28□□□□□ -0.12
LINGO3P0C6S8 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINGO3P0C6S8 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.28□□□□□ -0.12
LINGO3P0C6S8 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINGO3P0C6S8 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
LINGO3P0C6S8 DGKA-202ENST00000394147 2770 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
LINGO3P0C6S8 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
LINGO3P0C6S8 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINGO3P0C6S8 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LINGO3P0C6S8 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINGO3P0C6S8 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.28□□□□□ -0.12
LINGO3P0C6S8 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.28□□□□□ -0.12
LINGO3P0C6S8 BCRP1-201ENST00000444246 691 ntBASIC14.28□□□□□ -0.12
LINGO3P0C6S8 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.28□□□□□ -0.12
LINGO3P0C6S8 SPDYE18-201ENST00000510091 1050 ntBASIC14.28□□□□□ -0.12
LINGO3P0C6S8 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.28□□□□□ -0.12
LINGO3P0C6S8 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.28□□□□□ -0.12
LINGO3P0C6S8 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LINGO3P0C6S8 TIMM17BP1-201ENST00000545713 516 ntBASIC14.28□□□□□ -0.12
LINGO3P0C6S8 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINGO3P0C6S8 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINGO3P0C6S8 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINGO3P0C6S8 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
LINGO3P0C6S8 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.28□□□□□ -0.12
LINGO3P0C6S8 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.28□□□□□ -0.12
LINGO3P0C6S8 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC14.28□□□□□ -0.12
LINGO3P0C6S8 AC011467.4-201ENST00000594891 528 ntBASIC14.28□□□□□ -0.12
LINGO3P0C6S8 AL096865.1-201ENST00000606796 927 ntBASIC14.28□□□□□ -0.12
LINGO3P0C6S8 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LINGO3P0C6S8 AL031719.1-201ENST00000623365 2587 ntBASIC14.28□□□□□ -0.12
LINGO3P0C6S8 AC111170.3-201ENST00000624282 2464 ntBASIC14.28□□□□□ -0.12
LINGO3P0C6S8 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
LINGO3P0C6S8 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINGO3P0C6S8 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINGO3P0C6S8 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINGO3P0C6S8 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINGO3P0C6S8 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINGO3P0C6S8 C10orf90-202ENST00000356858 2995 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
LINGO3P0C6S8 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC14.28□□□□□ -0.12
LINGO3P0C6S8 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
LINGO3P0C6S8 SLC8A3-205ENST00000394330 2622 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LINGO3P0C6S8 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LINGO3P0C6S8 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.27□□□□□ -0.12
LINGO3P0C6S8 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
LINGO3P0C6S8 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC14.27□□□□□ -0.12
LINGO3P0C6S8 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
LINGO3P0C6S8 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC14.27□□□□□ -0.12
LINGO3P0C6S8 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINGO3P0C6S8 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINGO3P0C6S8 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LINGO3P0C6S8 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
LINGO3P0C6S8 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
LINGO3P0C6S8 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.27□□□□□ -0.12
LINGO3P0C6S8 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINGO3P0C6S8 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINGO3P0C6S8 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LINGO3P0C6S8 AC138969.3-201ENST00000546612 1459 ntBASIC14.27□□□□□ -0.12
LINGO3P0C6S8 AC138932.2-201ENST00000548268 1459 ntBASIC14.27□□□□□ -0.12
LINGO3P0C6S8 AC126755.4-201ENST00000549796 1459 ntBASIC14.27□□□□□ -0.12
LINGO3P0C6S8 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
LINGO3P0C6S8 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINGO3P0C6S8 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
LINGO3P0C6S8 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LINGO3P0C6S8 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
LINGO3P0C6S8 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINGO3P0C6S8 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINGO3P0C6S8 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LINGO3P0C6S8 AL133267.1-201ENST00000398220 340 ntBASIC14.27□□□□□ -0.13
LINGO3P0C6S8 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.27□□□□□ -0.13
LINGO3P0C6S8 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LINGO3P0C6S8 TOMM22P5-201ENST00000416399 439 ntBASIC14.27□□□□□ -0.13
LINGO3P0C6S8 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.27□□□□□ -0.13
LINGO3P0C6S8 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINGO3P0C6S8 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.27□□□□□ -0.13
LINGO3P0C6S8 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LINGO3P0C6S8 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.27□□□□□ -0.13
LINGO3P0C6S8 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms