Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
RAB40ALP0C0E4 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.83□□□□□ -0.19
RAB40ALP0C0E4 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
RAB40ALP0C0E4 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAB40ALP0C0E4 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAB40ALP0C0E4 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC13.83□□□□□ -0.2
RAB40ALP0C0E4 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RAB40ALP0C0E4 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
RAB40ALP0C0E4 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
RAB40ALP0C0E4 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAB40ALP0C0E4 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.83□□□□□ -0.2
RAB40ALP0C0E4 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAB40ALP0C0E4 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
RAB40ALP0C0E4 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC13.83□□□□□ -0.2
RAB40ALP0C0E4 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
RAB40ALP0C0E4 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RAB40ALP0C0E4 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RAB40ALP0C0E4 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RAB40ALP0C0E4 AC239868.1-201ENST00000369385 493 ntBASIC13.83□□□□□ -0.2
RAB40ALP0C0E4 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAB40ALP0C0E4 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC13.83□□□□□ -0.2
RAB40ALP0C0E4 AL645933.1-201ENST00000440087 609 ntBASIC13.83□□□□□ -0.2
RAB40ALP0C0E4 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC13.83□□□□□ -0.2
RAB40ALP0C0E4 POU5F1P2-201ENST00000521750 823 ntBASIC13.83□□□□□ -0.2
RAB40ALP0C0E4 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC13.83□□□□□ -0.2
RAB40ALP0C0E4 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
RAB40ALP0C0E4 AC020922.3-201ENST00000595064 547 ntBASIC13.83□□□□□ -0.2
RAB40ALP0C0E4 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC13.83□□□□□ -0.2
RAB40ALP0C0E4 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC13.83□□□□□ -0.2
RAB40ALP0C0E4 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC13.83□□□□□ -0.2
RAB40ALP0C0E4 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC13.83□□□□□ -0.2
RAB40ALP0C0E4 AC128714.1-201ENST00000637035 887 ntBASIC13.83□□□□□ -0.2
RAB40ALP0C0E4 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RAB40ALP0C0E4 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
RAB40ALP0C0E4 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAB40ALP0C0E4 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAB40ALP0C0E4 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
RAB40ALP0C0E4 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAB40ALP0C0E4 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAB40ALP0C0E4 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAB40ALP0C0E4 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.83□□□□□ -0.2
RAB40ALP0C0E4 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAB40ALP0C0E4 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAB40ALP0C0E4 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RAB40ALP0C0E4 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RAB40ALP0C0E4 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
RAB40ALP0C0E4 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC13.83□□□□□ -0.2
RAB40ALP0C0E4 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.83□□□□□ -0.2
RAB40ALP0C0E4 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
RAB40ALP0C0E4 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAB40ALP0C0E4 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
RAB40ALP0C0E4 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAB40ALP0C0E4 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
RAB40ALP0C0E4 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB40ALP0C0E4 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.82□□□□□ -0.2
RAB40ALP0C0E4 AC144522.1-201ENST00000625111 1658 ntBASIC13.82□□□□□ -0.2
RAB40ALP0C0E4 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB40ALP0C0E4 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC13.82□□□□□ -0.2
RAB40ALP0C0E4 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB40ALP0C0E4 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
RAB40ALP0C0E4 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.82□□□□□ -0.2
RAB40ALP0C0E4 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB40ALP0C0E4 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.82□□□□□ -0.2
RAB40ALP0C0E4 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB40ALP0C0E4 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
RAB40ALP0C0E4 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RAB40ALP0C0E4 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB40ALP0C0E4 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC13.82□□□□□ -0.2
RAB40ALP0C0E4 HINT2P1-201ENST00000419438 481 ntBASIC13.82□□□□□ -0.2
RAB40ALP0C0E4 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC13.82□□□□□ -0.2
RAB40ALP0C0E4 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC13.82□□□□□ -0.2
RAB40ALP0C0E4 TMEM198B-204ENST00000484016 896 ntBASIC13.82□□□□□ -0.2
RAB40ALP0C0E4 AC006122.1-201ENST00000493323 440 ntBASIC13.82□□□□□ -0.2
RAB40ALP0C0E4 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC13.82□□□□□ -0.2
RAB40ALP0C0E4 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC13.82□□□□□ -0.2
RAB40ALP0C0E4 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC13.82□□□□□ -0.2
RAB40ALP0C0E4 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC13.82□□□□□ -0.2
RAB40ALP0C0E4 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC13.82□□□□□ -0.2
RAB40ALP0C0E4 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC13.82□□□□□ -0.2
RAB40ALP0C0E4 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC13.82□□□□□ -0.2
RAB40ALP0C0E4 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
RAB40ALP0C0E4 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC13.82□□□□□ -0.2
RAB40ALP0C0E4 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC13.82□□□□□ -0.2
RAB40ALP0C0E4 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC13.82□□□□□ -0.2
RAB40ALP0C0E4 AC133540.1-201ENST00000620845 1019 ntBASIC13.82□□□□□ -0.2
RAB40ALP0C0E4 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB40ALP0C0E4 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
RAB40ALP0C0E4 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
RAB40ALP0C0E4 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB40ALP0C0E4 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB40ALP0C0E4 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB40ALP0C0E4 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB40ALP0C0E4 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB40ALP0C0E4 MRPL37P1-201ENST00000592451 1337 ntBASIC13.82□□□□□ -0.2
RAB40ALP0C0E4 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB40ALP0C0E4 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.82□□□□□ -0.2
RAB40ALP0C0E4 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB40ALP0C0E4 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.82□□□□□ -0.2
RAB40ALP0C0E4 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
RAB40ALP0C0E4 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms