Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TPM1P09493 AC022616.1-201ENST00000518688 554 ntBASIC16.26■□□□□ 0.19
TPM1P09493 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.26■□□□□ 0.19
TPM1P09493 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.26■□□□□ 0.19
TPM1P09493 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.26■□□□□ 0.19
TPM1P09493 AL671883.3-201ENST00000603274 991 ntBASIC16.26■□□□□ 0.19
TPM1P09493 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.26■□□□□ 0.19
TPM1P09493 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.26■□□□□ 0.19
TPM1P09493 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TPM1P09493 AL603764.1-201ENST00000636452 321 ntBASIC16.26■□□□□ 0.19
TPM1P09493 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TPM1P09493 PTPRVP-205ENST00000641549 5067 ntBASIC16.26■□□□□ 0.19
TPM1P09493 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC16.26■□□□□ 0.19
TPM1P09493 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TPM1P09493 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TPM1P09493 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC16.26■□□□□ 0.19
TPM1P09493 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TPM1P09493 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
TPM1P09493 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TPM1P09493 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TPM1P09493 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
TPM1P09493 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
TPM1P09493 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TPM1P09493 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC16.26■□□□□ 0.19
TPM1P09493 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TPM1P09493 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TPM1P09493 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
TPM1P09493 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TPM1P09493 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
TPM1P09493 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TPM1P09493 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TPM1P09493 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TPM1P09493 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TPM1P09493 NUTM2HP-201ENST00000442076 2498 ntBASIC16.25■□□□□ 0.19
TPM1P09493 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC16.25■□□□□ 0.19
TPM1P09493 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TPM1P09493 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC16.25■□□□□ 0.19
TPM1P09493 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TPM1P09493 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TPM1P09493 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TPM1P09493 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC16.25■□□□□ 0.19
TPM1P09493 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TPM1P09493 AC215219.1-201ENST00000400706 1817 ntBASIC16.25■□□□□ 0.19
TPM1P09493 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TPM1P09493 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TPM1P09493 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TPM1P09493 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC16.25■□□□□ 0.19
TPM1P09493 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
TPM1P09493 AL139094.1-201ENST00000405549 1188 ntBASIC16.25■□□□□ 0.19
TPM1P09493 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.25■□□□□ 0.19
TPM1P09493 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.25■□□□□ 0.19
TPM1P09493 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.25■□□□□ 0.19
TPM1P09493 AC067863.1-201ENST00000494933 530 ntBASIC16.25■□□□□ 0.19
TPM1P09493 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.25■□□□□ 0.19
TPM1P09493 AC109322.1-201ENST00000524499 1264 ntBASIC16.25■□□□□ 0.19
TPM1P09493 DUX4L47-201ENST00000566374 394 ntBASIC16.25■□□□□ 0.19
TPM1P09493 AC027612.4-201ENST00000605371 583 ntBASIC16.25■□□□□ 0.19
TPM1P09493 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TPM1P09493 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
TPM1P09493 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.25■□□□□ 0.19
TPM1P09493 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TPM1P09493 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC16.25■□□□□ 0.19
TPM1P09493 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TPM1P09493 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC16.25■□□□□ 0.19
TPM1P09493 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TPM1P09493 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TPM1P09493 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TPM1P09493 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC16.25■□□□□ 0.19
TPM1P09493 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC16.25■□□□□ 0.19
TPM1P09493 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC16.25■□□□□ 0.19
TPM1P09493 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TPM1P09493 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC16.25■□□□□ 0.19
TPM1P09493 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TPM1P09493 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TPM1P09493 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TPM1P09493 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TPM1P09493 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
TPM1P09493 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
TPM1P09493 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC16.24■□□□□ 0.19
TPM1P09493 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TPM1P09493 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TPM1P09493 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
TPM1P09493 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TPM1P09493 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.24■□□□□ 0.19
TPM1P09493 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
TPM1P09493 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC16.24■□□□□ 0.19
TPM1P09493 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TPM1P09493 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.24■□□□□ 0.19
TPM1P09493 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
TPM1P09493 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TPM1P09493 TSEN15P1-201ENST00000423257 515 ntBASIC16.24■□□□□ 0.19
TPM1P09493 AP006288.1-201ENST00000446065 395 ntBASIC16.24■□□□□ 0.19
TPM1P09493 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
TPM1P09493 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TPM1P09493 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.24■□□□□ 0.19
TPM1P09493 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TPM1P09493 AC004449.1-201ENST00000564240 433 ntBASIC16.24■□□□□ 0.19
TPM1P09493 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.24■□□□□ 0.19
TPM1P09493 AL158211.3-201ENST00000607385 239 ntBASIC16.24■□□□□ 0.19
TPM1P09493 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms