Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC15.76■□□□□ 0.11
TUBB4AP04350 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC15.76■□□□□ 0.11
TUBB4AP04350 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TUBB4AP04350 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TUBB4AP04350 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TUBB4AP04350 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC15.76■□□□□ 0.11
TUBB4AP04350 AL022323.5-201ENST00000624101 2059 ntBASIC15.76■□□□□ 0.11
TUBB4AP04350 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TUBB4AP04350 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
TUBB4AP04350 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TUBB4AP04350 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
TUBB4AP04350 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC15.76■□□□□ 0.11
TUBB4AP04350 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.76■□□□□ 0.11
TUBB4AP04350 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TUBB4AP04350 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
TUBB4AP04350 FAM58CP-201ENST00000435741 640 ntBASIC15.76■□□□□ 0.11
TUBB4AP04350 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.76■□□□□ 0.11
TUBB4AP04350 DNAJB3-201ENST00000446806 729 ntBASIC15.76■□□□□ 0.11
TUBB4AP04350 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.76■□□□□ 0.11
TUBB4AP04350 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.76■□□□□ 0.11
TUBB4AP04350 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC15.76■□□□□ 0.11
TUBB4AP04350 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.76■□□□□ 0.11
TUBB4AP04350 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
TUBB4AP04350 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.76■□□□□ 0.11
TUBB4AP04350 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.76■□□□□ 0.11
TUBB4AP04350 AC004461.2-201ENST00000629517 803 ntBASIC15.76■□□□□ 0.11
TUBB4AP04350 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.76■□□□□ 0.11
TUBB4AP04350 PRSS30P-206ENST00000641773 873 ntBASIC15.76■□□□□ 0.11
TUBB4AP04350 AC092865.6-201ENST00000642101 219 ntBASIC15.76■□□□□ 0.11
TUBB4AP04350 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TUBB4AP04350 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TUBB4AP04350 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.76■□□□□ 0.11
TUBB4AP04350 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TUBB4AP04350 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC15.76■□□□□ 0.11
TUBB4AP04350 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TUBB4AP04350 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
TUBB4AP04350 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC15.76■□□□□ 0.11
TUBB4AP04350 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC15.76■□□□□ 0.11
TUBB4AP04350 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TUBB4AP04350 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC15.76■□□□□ 0.11
TUBB4AP04350 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TUBB4AP04350 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC15.76■□□□□ 0.11
TUBB4AP04350 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC15.76■□□□□ 0.11
TUBB4AP04350 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TUBB4AP04350 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
TUBB4AP04350 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
TUBB4AP04350 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TUBB4AP04350 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TUBB4AP04350 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TUBB4AP04350 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
TUBB4AP04350 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TUBB4AP04350 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
TUBB4AP04350 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TUBB4AP04350 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC15.75■□□□□ 0.11
TUBB4AP04350 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TUBB4AP04350 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TUBB4AP04350 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TUBB4AP04350 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TUBB4AP04350 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
TUBB4AP04350 MTND6P24-201ENST00000440466 518 ntBASIC15.75■□□□□ 0.11
TUBB4AP04350 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.75■□□□□ 0.11
TUBB4AP04350 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
TUBB4AP04350 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.75■□□□□ 0.11
TUBB4AP04350 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.75■□□□□ 0.11
TUBB4AP04350 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
TUBB4AP04350 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.75■□□□□ 0.11
TUBB4AP04350 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
TUBB4AP04350 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TUBB4AP04350 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.75■□□□□ 0.11
TUBB4AP04350 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TUBB4AP04350 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.75■□□□□ 0.11
TUBB4AP04350 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TUBB4AP04350 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
TUBB4AP04350 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TUBB4AP04350 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TUBB4AP04350 AGAP12P-201ENST00000585227 2359 ntBASIC15.75■□□□□ 0.11
TUBB4AP04350 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC15.75■□□□□ 0.11
TUBB4AP04350 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TUBB4AP04350 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC15.75■□□□□ 0.11
TUBB4AP04350 GOLGA6L17P-202ENST00000614358 1398 ntBASIC15.75■□□□□ 0.11
TUBB4AP04350 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
TUBB4AP04350 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
TUBB4AP04350 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC15.74■□□□□ 0.11
TUBB4AP04350 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TUBB4AP04350 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TUBB4AP04350 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
TUBB4AP04350 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
TUBB4AP04350 AC064801.2-201ENST00000625052 1303 ntBASIC15.74■□□□□ 0.11
TUBB4AP04350 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TUBB4AP04350 AC139712.1-201ENST00000378256 1875 ntBASIC15.74■□□□□ 0.11
TUBB4AP04350 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC15.74■□□□□ 0.11
TUBB4AP04350 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TUBB4AP04350 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TUBB4AP04350 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC15.74■□□□□ 0.11
TUBB4AP04350 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TUBB4AP04350 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
TUBB4AP04350 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TUBB4AP04350 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TUBB4AP04350 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TUBB4AP04350 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms