Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC15.42■□□□□ 0.06
APOEP02649 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC15.42■□□□□ 0.06
APOEP02649 AL358472.3-201ENST00000608147 415 ntBASIC15.42■□□□□ 0.06
APOEP02649 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
APOEP02649 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
APOEP02649 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
APOEP02649 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.42■□□□□ 0.06
APOEP02649 AC092135.3-201ENST00000624151 1846 ntBASIC15.42■□□□□ 0.06
APOEP02649 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
APOEP02649 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
APOEP02649 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.42■□□□□ 0.06
APOEP02649 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
APOEP02649 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
APOEP02649 REXO1L6P-201ENST00000603433 1515 ntBASIC15.42■□□□□ 0.06
APOEP02649 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.42■□□□□ 0.06
APOEP02649 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
APOEP02649 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
APOEP02649 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
APOEP02649 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
APOEP02649 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
APOEP02649 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC15.42■□□□□ 0.06
APOEP02649 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
APOEP02649 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
APOEP02649 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
APOEP02649 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
APOEP02649 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
APOEP02649 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
APOEP02649 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.41■□□□□ 0.06
APOEP02649 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
APOEP02649 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
APOEP02649 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.41■□□□□ 0.06
APOEP02649 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
APOEP02649 CICP4-201ENST00000447359 2812 ntBASIC15.41■□□□□ 0.06
APOEP02649 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
APOEP02649 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.41■□□□□ 0.06
APOEP02649 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
APOEP02649 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
APOEP02649 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
APOEP02649 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.41■□□□□ 0.06
APOEP02649 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
APOEP02649 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
APOEP02649 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
APOEP02649 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC15.41■□□□□ 0.06
APOEP02649 AC117489.1-201ENST00000625169 3217 ntBASIC15.41■□□□□ 0.06
APOEP02649 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
APOEP02649 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
APOEP02649 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
APOEP02649 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
APOEP02649 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
APOEP02649 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
APOEP02649 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC15.41■□□□□ 0.06
APOEP02649 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC15.41■□□□□ 0.06
APOEP02649 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.41■□□□□ 0.06
APOEP02649 RN7SL219P-201ENST00000582872 296 ntBASIC15.41■□□□□ 0.06
APOEP02649 AP001002.3-201ENST00000623482 206 ntBASIC15.41■□□□□ 0.06
APOEP02649 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC15.41■□□□□ 0.06
APOEP02649 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
APOEP02649 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
APOEP02649 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.41■□□□□ 0.06
APOEP02649 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.41■□□□□ 0.06
APOEP02649 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
APOEP02649 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
APOEP02649 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
APOEP02649 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
APOEP02649 DKFZP434A062-201ENST00000573103 5021 ntBASIC15.41■□□□□ 0.06
APOEP02649 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC15.41■□□□□ 0.06
APOEP02649 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
APOEP02649 MRPL37P1-201ENST00000592451 1337 ntBASIC15.41■□□□□ 0.06
APOEP02649 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.41■□□□□ 0.06
APOEP02649 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC15.41■□□□□ 0.06
APOEP02649 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
APOEP02649 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
APOEP02649 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC15.4■□□□□ 0.06
APOEP02649 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.4■□□□□ 0.06
APOEP02649 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.4■□□□□ 0.06
APOEP02649 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.4■□□□□ 0.06
APOEP02649 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC15.4■□□□□ 0.06
APOEP02649 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
APOEP02649 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
APOEP02649 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
APOEP02649 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
APOEP02649 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.4■□□□□ 0.06
APOEP02649 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
APOEP02649 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
APOEP02649 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
APOEP02649 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
APOEP02649 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
APOEP02649 MIR326-201ENST00000362220 95 ntBASIC15.4■□□□□ 0.06
APOEP02649 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.4■□□□□ 0.06
APOEP02649 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
APOEP02649 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
APOEP02649 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC15.4■□□□□ 0.06
APOEP02649 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
APOEP02649 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
APOEP02649 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.4■□□□□ 0.06
APOEP02649 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC15.4■□□□□ 0.06
APOEP02649 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
APOEP02649 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC15.4■□□□□ 0.06
APOEP02649 BX088702.1-201ENST00000610784 235 ntBASIC15.4■□□□□ 0.06
APOEP02649 AC091271.1-201ENST00000611877 1162 ntBASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms