Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
HLA-DQA2P01906 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
HLA-DQA2P01906 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
HLA-DQA2P01906 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
HLA-DQA2P01906 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
HLA-DQA2P01906 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
HLA-DQA2P01906 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.28
HLA-DQA2P01906 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HLA-DQA2P01906 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
HLA-DQA2P01906 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HLA-DQA2P01906 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HLA-DQA2P01906 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
HLA-DQA2P01906 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
HLA-DQA2P01906 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.27□□□□□ -0.29
HLA-DQA2P01906 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.27□□□□□ -0.29
HLA-DQA2P01906 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.27□□□□□ -0.29
HLA-DQA2P01906 MIR770-201ENST00000390219 98 ntBASIC13.27□□□□□ -0.29
HLA-DQA2P01906 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
HLA-DQA2P01906 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC13.27□□□□□ -0.29
HLA-DQA2P01906 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.27□□□□□ -0.29
HLA-DQA2P01906 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC13.27□□□□□ -0.29
HLA-DQA2P01906 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HLA-DQA2P01906 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
HLA-DQA2P01906 TSPY16P-201ENST00000449843 468 ntBASIC13.27□□□□□ -0.29
HLA-DQA2P01906 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.27□□□□□ -0.29
HLA-DQA2P01906 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC13.27□□□□□ -0.29
HLA-DQA2P01906 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.27□□□□□ -0.29
HLA-DQA2P01906 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HLA-DQA2P01906 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.27□□□□□ -0.29
HLA-DQA2P01906 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HLA-DQA2P01906 CICP4-201ENST00000447359 2812 ntBASIC13.27□□□□□ -0.29
HLA-DQA2P01906 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HLA-DQA2P01906 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HLA-DQA2P01906 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.27□□□□□ -0.29
HLA-DQA2P01906 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HLA-DQA2P01906 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.27□□□□□ -0.29
HLA-DQA2P01906 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HLA-DQA2P01906 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
HLA-DQA2P01906 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
HLA-DQA2P01906 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HLA-DQA2P01906 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
HLA-DQA2P01906 AC090114.2-201ENST00000608477 7054 ntBASIC13.27□□□□□ -0.29
HLA-DQA2P01906 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
HLA-DQA2P01906 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.27□□□□□ -0.29
HLA-DQA2P01906 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.27□□□□□ -0.29
HLA-DQA2P01906 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HLA-DQA2P01906 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HLA-DQA2P01906 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HLA-DQA2P01906 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
HLA-DQA2P01906 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
HLA-DQA2P01906 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
HLA-DQA2P01906 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HLA-DQA2P01906 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HLA-DQA2P01906 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HLA-DQA2P01906 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HLA-DQA2P01906 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
HLA-DQA2P01906 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HLA-DQA2P01906 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HLA-DQA2P01906 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
HLA-DQA2P01906 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC13.26□□□□□ -0.29
HLA-DQA2P01906 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.26□□□□□ -0.29
HLA-DQA2P01906 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
HLA-DQA2P01906 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
HLA-DQA2P01906 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HLA-DQA2P01906 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HLA-DQA2P01906 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.26□□□□□ -0.29
HLA-DQA2P01906 AC098850.1-201ENST00000419919 790 ntBASIC13.26□□□□□ -0.29
HLA-DQA2P01906 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HLA-DQA2P01906 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.26□□□□□ -0.29
HLA-DQA2P01906 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.26□□□□□ -0.29
HLA-DQA2P01906 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HLA-DQA2P01906 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
HLA-DQA2P01906 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC13.26□□□□□ -0.29
HLA-DQA2P01906 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
HLA-DQA2P01906 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
HLA-DQA2P01906 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
HLA-DQA2P01906 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
HLA-DQA2P01906 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HLA-DQA2P01906 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.26□□□□□ -0.29
HLA-DQA2P01906 ENPP7P5-201ENST00000541031 1031 ntBASIC13.26□□□□□ -0.29
HLA-DQA2P01906 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.26□□□□□ -0.29
HLA-DQA2P01906 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.26□□□□□ -0.29
HLA-DQA2P01906 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HLA-DQA2P01906 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
HLA-DQA2P01906 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.26□□□□□ -0.29
HLA-DQA2P01906 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.26□□□□□ -0.29
HLA-DQA2P01906 TMEM261P1-201ENST00000604899 340 ntBASIC13.26□□□□□ -0.29
HLA-DQA2P01906 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.26□□□□□ -0.29
HLA-DQA2P01906 AJ011932.1-201ENST00000621707 465 ntBASIC13.26□□□□□ -0.29
HLA-DQA2P01906 AC092135.3-201ENST00000624151 1846 ntBASIC13.26□□□□□ -0.29
HLA-DQA2P01906 CU634019.7-201ENST00000624153 1185 ntBASIC13.26□□□□□ -0.29
HLA-DQA2P01906 FP236241.2-201ENST00000624906 1185 ntBASIC13.26□□□□□ -0.29
HLA-DQA2P01906 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC13.26□□□□□ -0.29
HLA-DQA2P01906 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
HLA-DQA2P01906 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
HLA-DQA2P01906 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HLA-DQA2P01906 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HLA-DQA2P01906 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
HLA-DQA2P01906 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
HLA-DQA2P01906 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms