Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.16□□□□□ -0.3
CDRT1O95170 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.16□□□□□ -0.3
CDRT1O95170 RPSAP43-201ENST00000402237 625 ntBASIC13.16□□□□□ -0.3
CDRT1O95170 AC211486.1-202ENST00000416371 468 ntBASIC13.16□□□□□ -0.3
CDRT1O95170 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC13.16□□□□□ -0.3
CDRT1O95170 COX10-202ENST00000429152 875 ntTSL 2 BASIC13.16□□□□□ -0.3
CDRT1O95170 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC13.16□□□□□ -0.3
CDRT1O95170 RPL13P2-201ENST00000440687 659 ntBASIC13.16□□□□□ -0.3
CDRT1O95170 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDRT1O95170 AC004066.1-201ENST00000502488 802 ntBASIC13.16□□□□□ -0.3
CDRT1O95170 AC211476.1-201ENST00000503899 468 ntBASIC13.16□□□□□ -0.3
CDRT1O95170 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC13.16□□□□□ -0.3
CDRT1O95170 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC13.16□□□□□ -0.3
CDRT1O95170 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDRT1O95170 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.16□□□□□ -0.3
CDRT1O95170 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC13.16□□□□□ -0.3
CDRT1O95170 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC13.16□□□□□ -0.3
CDRT1O95170 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC13.16□□□□□ -0.3
CDRT1O95170 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.16□□□□□ -0.3
CDRT1O95170 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDRT1O95170 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CDRT1O95170 AL157996.1-201ENST00000624684 2299 ntBASIC13.16□□□□□ -0.3
CDRT1O95170 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC13.16□□□□□ -0.3
CDRT1O95170 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDRT1O95170 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDRT1O95170 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDRT1O95170 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC13.16□□□□□ -0.3
CDRT1O95170 GOLGA6L17P-202ENST00000614358 1398 ntBASIC13.16□□□□□ -0.3
CDRT1O95170 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDRT1O95170 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CDRT1O95170 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
CDRT1O95170 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CDRT1O95170 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDRT1O95170 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
CDRT1O95170 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDRT1O95170 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
CDRT1O95170 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC13.15□□□□□ -0.3
CDRT1O95170 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CDRT1O95170 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDRT1O95170 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDRT1O95170 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDRT1O95170 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC13.15□□□□□ -0.3
CDRT1O95170 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDRT1O95170 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDRT1O95170 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDRT1O95170 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC13.15□□□□□ -0.3
CDRT1O95170 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDRT1O95170 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CDRT1O95170 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.15□□□□□ -0.3
CDRT1O95170 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.15□□□□□ -0.3
CDRT1O95170 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC13.15□□□□□ -0.3
CDRT1O95170 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC13.15□□□□□ -0.3
CDRT1O95170 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC13.15□□□□□ -0.3
CDRT1O95170 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.15□□□□□ -0.3
CDRT1O95170 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.15□□□□□ -0.3
CDRT1O95170 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.15□□□□□ -0.3
CDRT1O95170 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.15□□□□□ -0.3
CDRT1O95170 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.15□□□□□ -0.3
CDRT1O95170 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.15□□□□□ -0.3
CDRT1O95170 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.15□□□□□ -0.3
CDRT1O95170 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDRT1O95170 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDRT1O95170 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.15□□□□□ -0.3
CDRT1O95170 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDRT1O95170 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDRT1O95170 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CDRT1O95170 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDRT1O95170 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC13.15□□□□□ -0.3
CDRT1O95170 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDRT1O95170 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDRT1O95170 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
CDRT1O95170 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CDRT1O95170 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CDRT1O95170 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.15□□□□□ -0.3
CDRT1O95170 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
CDRT1O95170 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDRT1O95170 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDRT1O95170 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CDRT1O95170 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDRT1O95170 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDRT1O95170 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC13.15□□□□□ -0.3
CDRT1O95170 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDRT1O95170 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CDRT1O95170 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
CDRT1O95170 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
CDRT1O95170 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
CDRT1O95170 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
CDRT1O95170 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC13.15□□□□□ -0.31
CDRT1O95170 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
CDRT1O95170 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDRT1O95170 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CDRT1O95170 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.14□□□□□ -0.31
CDRT1O95170 KRT8P14-201ENST00000414254 1442 ntBASIC13.14□□□□□ -0.31
CDRT1O95170 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDRT1O95170 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CDRT1O95170 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDRT1O95170 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDRT1O95170 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDRT1O95170 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDRT1O95170 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms