Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.8□□□□□ -0.04
GPC4O75487 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GPC4O75487 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
GPC4O75487 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GPC4O75487 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
GPC4O75487 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
GPC4O75487 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GPC4O75487 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC14.8□□□□□ -0.04
GPC4O75487 KRT17P7-201ENST00000451704 1104 ntBASIC14.8□□□□□ -0.04
GPC4O75487 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.8□□□□□ -0.04
GPC4O75487 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC14.8□□□□□ -0.04
GPC4O75487 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14.8□□□□□ -0.04
GPC4O75487 RN7SL48P-201ENST00000579283 293 ntBASIC14.8□□□□□ -0.04
GPC4O75487 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC14.8□□□□□ -0.04
GPC4O75487 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC14.8□□□□□ -0.04
GPC4O75487 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
GPC4O75487 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
GPC4O75487 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
GPC4O75487 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
GPC4O75487 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
GPC4O75487 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
GPC4O75487 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
GPC4O75487 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
GPC4O75487 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
GPC4O75487 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC14.8□□□□□ -0.04
GPC4O75487 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GPC4O75487 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GPC4O75487 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GPC4O75487 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.8□□□□□ -0.04
GPC4O75487 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GPC4O75487 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
GPC4O75487 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
GPC4O75487 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
GPC4O75487 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GPC4O75487 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC14.8□□□□□ -0.04
GPC4O75487 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
GPC4O75487 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
GPC4O75487 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
GPC4O75487 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GPC4O75487 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
GPC4O75487 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
GPC4O75487 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
GPC4O75487 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC14.79□□□□□ -0.04
GPC4O75487 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.79□□□□□ -0.04
GPC4O75487 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GPC4O75487 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC14.79□□□□□ -0.04
GPC4O75487 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
GPC4O75487 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
GPC4O75487 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
GPC4O75487 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
GPC4O75487 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GPC4O75487 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.79□□□□□ -0.04
GPC4O75487 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.79□□□□□ -0.04
GPC4O75487 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.79□□□□□ -0.04
GPC4O75487 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.79□□□□□ -0.04
GPC4O75487 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.79□□□□□ -0.04
GPC4O75487 BCRP2-202ENST00000447763 634 ntBASIC14.79□□□□□ -0.04
GPC4O75487 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.79□□□□□ -0.04
GPC4O75487 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
GPC4O75487 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC14.79□□□□□ -0.04
GPC4O75487 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC14.79□□□□□ -0.04
GPC4O75487 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
GPC4O75487 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.79□□□□□ -0.04
GPC4O75487 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
GPC4O75487 BCRP6-201ENST00000510112 632 ntBASIC14.79□□□□□ -0.04
GPC4O75487 BCRP7-201ENST00000511549 544 ntBASIC14.79□□□□□ -0.04
GPC4O75487 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.79□□□□□ -0.04
GPC4O75487 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
GPC4O75487 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
GPC4O75487 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC14.79□□□□□ -0.04
GPC4O75487 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.79□□□□□ -0.04
GPC4O75487 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
GPC4O75487 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
GPC4O75487 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC14.79□□□□□ -0.04
GPC4O75487 AC025279.2-201ENST00000569730 653 ntBASIC14.79□□□□□ -0.04
GPC4O75487 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
GPC4O75487 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.79□□□□□ -0.04
GPC4O75487 AC004466.1-201ENST00000599515 1080 ntBASIC14.79□□□□□ -0.04
GPC4O75487 AL022328.1-201ENST00000610050 478 ntBASIC14.79□□□□□ -0.04
GPC4O75487 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.79□□□□□ -0.04
GPC4O75487 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.79□□□□□ -0.04
GPC4O75487 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC14.79□□□□□ -0.04
GPC4O75487 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.79□□□□□ -0.04
GPC4O75487 AC132938.4-201ENST00000623835 848 ntBASIC14.79□□□□□ -0.04
GPC4O75487 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
GPC4O75487 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.79□□□□□ -0.04
GPC4O75487 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GPC4O75487 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GPC4O75487 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
GPC4O75487 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
GPC4O75487 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.79□□□□□ -0.04
GPC4O75487 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.79□□□□□ -0.04
GPC4O75487 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
GPC4O75487 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
GPC4O75487 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
GPC4O75487 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
GPC4O75487 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GPC4O75487 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
GPC4O75487 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
GPC4O75487 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms