Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 AC137579.2-201ENST00000517714 551 ntTSL 4 BASIC19.96■□□□□ 0.79
NPHP4O75161 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC19.96■□□□□ 0.79
NPHP4O75161 AL162231.1-205ENST00000544078 338 ntAPPRIS P2 TSL 2 BASIC19.96■□□□□ 0.79
NPHP4O75161 GRAMD4P6-201ENST00000556999 244 ntBASIC19.96■□□□□ 0.79
NPHP4O75161 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC19.96■□□□□ 0.79
NPHP4O75161 AC022098.2-201ENST00000590528 518 ntTSL 4 BASIC19.96■□□□□ 0.79
NPHP4O75161 AC104506.1-201ENST00000609247 429 ntBASIC19.96■□□□□ 0.79
NPHP4O75161 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NPHP4O75161 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
NPHP4O75161 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NPHP4O75161 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
NPHP4O75161 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NPHP4O75161 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NPHP4O75161 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
NPHP4O75161 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
NPHP4O75161 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
NPHP4O75161 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NPHP4O75161 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NPHP4O75161 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NPHP4O75161 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NPHP4O75161 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NPHP4O75161 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NPHP4O75161 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC19.95■□□□□ 0.78
NPHP4O75161 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
NPHP4O75161 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NPHP4O75161 S100B-201ENST00000291700 877 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NPHP4O75161 CPSF4L-202ENST00000397671 1275 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
NPHP4O75161 RPL10-203ENST00000406022 748 ntTSL 3 BASIC19.95■□□□□ 0.78
NPHP4O75161 KRT18P44-201ENST00000416086 1285 ntBASIC19.95■□□□□ 0.78
NPHP4O75161 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC19.95■□□□□ 0.78
NPHP4O75161 AL359092.2-201ENST00000423330 585 ntBASIC19.95■□□□□ 0.78
NPHP4O75161 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC19.95■□□□□ 0.78
NPHP4O75161 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC19.95■□□□□ 0.78
NPHP4O75161 LINC01875-201ENST00000454477 660 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NPHP4O75161 RN7SL684P-201ENST00000465665 294 ntBASIC19.95■□□□□ 0.78
NPHP4O75161 RN7SL672P-201ENST00000474091 317 ntBASIC19.95■□□□□ 0.78
NPHP4O75161 AC011676.2-201ENST00000518520 584 ntTSL 2 BASIC19.95■□□□□ 0.78
NPHP4O75161 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC19.95■□□□□ 0.78
NPHP4O75161 AC010478.1-203ENST00000558403 532 ntTSL 4 BASIC19.95■□□□□ 0.78
NPHP4O75161 RN7SL480P-201ENST00000581481 294 ntBASIC19.95■□□□□ 0.78
NPHP4O75161 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NPHP4O75161 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC19.95■□□□□ 0.78
NPHP4O75161 AL049840.2-201ENST00000602722 535 ntBASIC19.95■□□□□ 0.78
NPHP4O75161 KRTAP10-4-202ENST00000616689 597 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
NPHP4O75161 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC19.95■□□□□ 0.78
NPHP4O75161 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
NPHP4O75161 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
NPHP4O75161 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NPHP4O75161 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
NPHP4O75161 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
NPHP4O75161 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
NPHP4O75161 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NPHP4O75161 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NPHP4O75161 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC19.95■□□□□ 0.78
NPHP4O75161 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NPHP4O75161 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
NPHP4O75161 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NPHP4O75161 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
NPHP4O75161 SARS-202ENST00000369923 1882 ntTSL 5 BASIC19.94■□□□□ 0.78
NPHP4O75161 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NPHP4O75161 PDE4DIP-202ENST00000369347 1137 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NPHP4O75161 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
NPHP4O75161 AC011284.1-201ENST00000427920 856 ntTSL 4 BASIC19.94■□□□□ 0.78
NPHP4O75161 AC007391.1-201ENST00000433893 504 ntTSL 2 BASIC19.94■□□□□ 0.78
NPHP4O75161 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC19.94■□□□□ 0.78
NPHP4O75161 PLA2G15-203ENST00000444212 943 ntTSL 2 BASIC19.94■□□□□ 0.78
NPHP4O75161 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC19.94■□□□□ 0.78
NPHP4O75161 AC009120.2-205ENST00000561921 490 ntTSL 3 BASIC19.94■□□□□ 0.78
NPHP4O75161 ACTBP9-201ENST00000587663 1099 ntBASIC19.94■□□□□ 0.78
NPHP4O75161 CLPP-205ENST00000596605 646 ntTSL 2 BASIC19.94■□□□□ 0.78
NPHP4O75161 KF455155.1-201ENST00000604493 303 ntBASIC19.94■□□□□ 0.78
NPHP4O75161 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NPHP4O75161 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NPHP4O75161 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC19.94■□□□□ 0.78
NPHP4O75161 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NPHP4O75161 SALL4P6-201ENST00000429385 1691 ntBASIC19.94■□□□□ 0.78
NPHP4O75161 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC19.94■□□□□ 0.78
NPHP4O75161 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
NPHP4O75161 SF1-209ENST00000433274 2317 ntTSL 2 BASIC19.94■□□□□ 0.78
NPHP4O75161 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
NPHP4O75161 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC19.94■□□□□ 0.78
NPHP4O75161 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC19.94■□□□□ 0.78
NPHP4O75161 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC19.94■□□□□ 0.78
NPHP4O75161 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC19.94■□□□□ 0.78
NPHP4O75161 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
NPHP4O75161 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NPHP4O75161 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NPHP4O75161 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NPHP4O75161 CD44-203ENST00000278386 484 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NPHP4O75161 GLRX2-202ENST00000367440 1131 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
NPHP4O75161 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NPHP4O75161 KRT8P6-201ENST00000399259 1207 ntBASIC19.93■□□□□ 0.78
NPHP4O75161 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC19.93■□□□□ 0.78
NPHP4O75161 DLGAP4-AS1-203ENST00000439595 1207 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NPHP4O75161 GLIPR1L2-203ENST00000547164 509 ntTSL 5 BASIC19.93■□□□□ 0.78
NPHP4O75161 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC19.93■□□□□ 0.78
NPHP4O75161 AC092327.2-201ENST00000595705 901 ntTSL 3 BASIC19.93■□□□□ 0.78
NPHP4O75161 AL080250.1-203ENST00000607799 747 ntTSL 2 BASIC19.93■□□□□ 0.78
NPHP4O75161 AL499606.1-201ENST00000627866 413 ntTSL 3 BASIC19.93■□□□□ 0.78
NPHP4O75161 LINC01398-202ENST00000634819 1292 ntTSL 5 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms