Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC12.82□□□□□ -0.36
XRCC2O43543 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC12.82□□□□□ -0.36
XRCC2O43543 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
XRCC2O43543 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
XRCC2O43543 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
XRCC2O43543 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
XRCC2O43543 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
XRCC2O43543 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
XRCC2O43543 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
XRCC2O43543 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC12.82□□□□□ -0.36
XRCC2O43543 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
XRCC2O43543 AC152010.1-201ENST00000415779 2006 ntBASIC12.82□□□□□ -0.36
XRCC2O43543 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
XRCC2O43543 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
XRCC2O43543 USP4-203ENST00000415188 1454 ntTSL 3 BASIC12.82□□□□□ -0.36
XRCC2O43543 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC12.82□□□□□ -0.36
XRCC2O43543 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC12.82□□□□□ -0.36
XRCC2O43543 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
XRCC2O43543 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
XRCC2O43543 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
XRCC2O43543 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
XRCC2O43543 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
XRCC2O43543 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
XRCC2O43543 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
XRCC2O43543 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
XRCC2O43543 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC12.82□□□□□ -0.36
XRCC2O43543 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC12.82□□□□□ -0.36
XRCC2O43543 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
XRCC2O43543 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC12.81□□□□□ -0.36
XRCC2O43543 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
XRCC2O43543 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC12.81□□□□□ -0.36
XRCC2O43543 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
XRCC2O43543 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
XRCC2O43543 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
XRCC2O43543 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
XRCC2O43543 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
XRCC2O43543 DKFZP434A062-201ENST00000573103 5021 ntBASIC12.81□□□□□ -0.36
XRCC2O43543 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC12.81□□□□□ -0.36
XRCC2O43543 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
XRCC2O43543 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
XRCC2O43543 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
XRCC2O43543 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
XRCC2O43543 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
XRCC2O43543 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC12.81□□□□□ -0.36
XRCC2O43543 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
XRCC2O43543 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
XRCC2O43543 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC12.81□□□□□ -0.36
XRCC2O43543 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
XRCC2O43543 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
XRCC2O43543 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC12.81□□□□□ -0.36
XRCC2O43543 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC12.81□□□□□ -0.36
XRCC2O43543 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
XRCC2O43543 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC12.81□□□□□ -0.36
XRCC2O43543 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC12.81□□□□□ -0.36
XRCC2O43543 CD8B2-202ENST00000417670 633 ntBASIC12.81□□□□□ -0.36
XRCC2O43543 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC12.81□□□□□ -0.36
XRCC2O43543 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC12.81□□□□□ -0.36
XRCC2O43543 KRT43P-201ENST00000434019 910 ntBASIC12.81□□□□□ -0.36
XRCC2O43543 AC016694.1-201ENST00000434179 700 ntBASIC12.81□□□□□ -0.36
XRCC2O43543 FAM8A4P-201ENST00000435433 1213 ntBASIC12.81□□□□□ -0.36
XRCC2O43543 BCRP2-202ENST00000447763 634 ntBASIC12.81□□□□□ -0.36
XRCC2O43543 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
XRCC2O43543 BCRP6-201ENST00000510112 632 ntBASIC12.81□□□□□ -0.36
XRCC2O43543 BCRP7-201ENST00000511549 544 ntBASIC12.81□□□□□ -0.36
XRCC2O43543 FUZ-207ENST00000526575 482 ntTSL 4 BASIC12.81□□□□□ -0.36
XRCC2O43543 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
XRCC2O43543 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
XRCC2O43543 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC12.81□□□□□ -0.36
XRCC2O43543 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC12.81□□□□□ -0.36
XRCC2O43543 RPL28-206ENST00000558752 671 ntTSL 3 BASIC12.81□□□□□ -0.36
XRCC2O43543 AC106820.3-201ENST00000561653 397 ntBASIC12.81□□□□□ -0.36
XRCC2O43543 APRT-204ENST00000563655 709 ntTSL 5 BASIC12.81□□□□□ -0.36
XRCC2O43543 AL596325.1-201ENST00000563991 1082 ntBASIC12.81□□□□□ -0.36
XRCC2O43543 MIR3197-201ENST00000582241 73 ntBASIC12.81□□□□□ -0.36
XRCC2O43543 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
XRCC2O43543 AC008735.3-201ENST00000596646 500 ntBASIC12.81□□□□□ -0.36
XRCC2O43543 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
XRCC2O43543 LARP4-220ENST00000615080 856 ntTSL 5 BASIC12.81□□□□□ -0.36
XRCC2O43543 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC12.81□□□□□ -0.36
XRCC2O43543 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC12.81□□□□□ -0.36
XRCC2O43543 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
XRCC2O43543 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
XRCC2O43543 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
XRCC2O43543 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
XRCC2O43543 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
XRCC2O43543 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
XRCC2O43543 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC12.81□□□□□ -0.36
XRCC2O43543 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
XRCC2O43543 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC12.81□□□□□ -0.36
XRCC2O43543 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
XRCC2O43543 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
XRCC2O43543 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC12.81□□□□□ -0.36
XRCC2O43543 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
XRCC2O43543 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
XRCC2O43543 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
XRCC2O43543 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
XRCC2O43543 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
XRCC2O43543 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC12.8□□□□□ -0.36
XRCC2O43543 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC12.8□□□□□ -0.36
XRCC2O43543 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms