Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHD2O14647 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CHD2O14647 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHD2O14647 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHD2O14647 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHD2O14647 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHD2O14647 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CHD2O14647 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CHD2O14647 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHD2O14647 AIG1-203ENST00000367596 559 ntTSL 2 BASIC19.6■□□□□ 0.73
CHD2O14647 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CHD2O14647 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
CHD2O14647 TOMM5-203ENST00000401811 789 ntTSL 2 BASIC19.6■□□□□ 0.73
CHD2O14647 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC19.6■□□□□ 0.73
CHD2O14647 MED15P3-201ENST00000413613 326 ntBASIC19.6■□□□□ 0.73
CHD2O14647 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC19.6■□□□□ 0.73
CHD2O14647 PES1P2-201ENST00000449745 1735 ntBASIC19.6■□□□□ 0.73
CHD2O14647 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CHD2O14647 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CHD2O14647 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHD2O14647 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC19.59■□□□□ 0.73
CHD2O14647 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHD2O14647 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC19.59■□□□□ 0.73
CHD2O14647 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CHD2O14647 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHD2O14647 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CHD2O14647 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHD2O14647 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC19.59■□□□□ 0.73
CHD2O14647 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHD2O14647 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CHD2O14647 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CHD2O14647 AC064850.1-201ENST00000413279 1398 ntBASIC19.59■□□□□ 0.73
CHD2O14647 DKKL1P1-201ENST00000400550 698 ntBASIC19.59■□□□□ 0.73
CHD2O14647 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CHD2O14647 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC19.59■□□□□ 0.73
CHD2O14647 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC19.59■□□□□ 0.73
CHD2O14647 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC19.59■□□□□ 0.73
CHD2O14647 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHD2O14647 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHD2O14647 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHD2O14647 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC19.59■□□□□ 0.73
CHD2O14647 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CHD2O14647 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CHD2O14647 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHD2O14647 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CHD2O14647 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CHD2O14647 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
CHD2O14647 TMEM60-201ENST00000257663 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CHD2O14647 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CHD2O14647 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC19.58■□□□□ 0.73
CHD2O14647 AC006328.1-201ENST00000437571 379 ntBASIC19.58■□□□□ 0.73
CHD2O14647 TPT1P6-201ENST00000458298 514 ntBASIC19.58■□□□□ 0.73
CHD2O14647 AC011676.3-201ENST00000520606 294 ntTSL 5 BASIC19.58■□□□□ 0.73
CHD2O14647 SLC13A2-205ENST00000545060 1276 ntTSL 5 BASIC19.58■□□□□ 0.73
CHD2O14647 CDIPT-AS1-202ENST00000565014 729 ntTSL 2 BASIC19.58■□□□□ 0.73
CHD2O14647 RN7SL605P-201ENST00000577229 281 ntBASIC19.58■□□□□ 0.73
CHD2O14647 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC19.58■□□□□ 0.73
CHD2O14647 Metazoa_SRP.156-201ENST00000622344 262 ntBASIC19.58■□□□□ 0.73
CHD2O14647 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.73
CHD2O14647 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
CHD2O14647 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC19.58■□□□□ 0.73
CHD2O14647 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC19.58■□□□□ 0.73
CHD2O14647 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CHD2O14647 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CHD2O14647 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC19.58■□□□□ 0.72
CHD2O14647 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHD2O14647 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHD2O14647 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CHD2O14647 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CHD2O14647 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CHD2O14647 AC068760.1-201ENST00000493579 1953 ntBASIC19.58■□□□□ 0.72
CHD2O14647 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CHD2O14647 AC138035.3-201ENST00000622706 2791 ntBASIC19.58■□□□□ 0.72
CHD2O14647 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CHD2O14647 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC19.58■□□□□ 0.72
CHD2O14647 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHD2O14647 AC068631.1-228ENST00000354642 742 ntTSL 5 BASIC19.58■□□□□ 0.72
CHD2O14647 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC19.58■□□□□ 0.72
CHD2O14647 AL031587.2-201ENST00000445483 414 ntTSL 5 BASIC19.58■□□□□ 0.72
CHD2O14647 SMIM15-202ENST00000507416 584 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
CHD2O14647 NKAPP1-204ENST00000555168 557 ntTSL 4 BASIC19.58■□□□□ 0.72
CHD2O14647 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC19.58■□□□□ 0.72
CHD2O14647 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC19.57■□□□□ 0.72
CHD2O14647 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHD2O14647 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC19.57■□□□□ 0.72
CHD2O14647 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CHD2O14647 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHD2O14647 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CHD2O14647 IL18BP-201ENST00000260049 1354 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHD2O14647 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC19.57■□□□□ 0.72
CHD2O14647 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CHD2O14647 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC19.57■□□□□ 0.72
CHD2O14647 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC19.57■□□□□ 0.72
CHD2O14647 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CHD2O14647 CRYBB2P1-204ENST00000509460 701 ntTSL 3 BASIC19.57■□□□□ 0.72
CHD2O14647 AC087442.1-201ENST00000525563 249 ntTSL 2 BASIC19.57■□□□□ 0.72
CHD2O14647 TCL1A-209ENST00000557043 980 ntTSL 3 BASIC19.57■□□□□ 0.72
CHD2O14647 RN7SL440P-201ENST00000577855 343 ntBASIC19.57■□□□□ 0.72
CHD2O14647 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHD2O14647 AL109954.1-202ENST00000564051 2148 ntBASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms