Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
CSNK1G3Q9Y6M4 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CSNK1G3Q9Y6M4 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CSNK1G3Q9Y6M4 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CSNK1G3Q9Y6M4 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CSNK1G3Q9Y6M4 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CSNK1G3Q9Y6M4 AC073150.1-201ENST00000450406 1084 ntBASIC14.37□□□□□ -0.11
CSNK1G3Q9Y6M4 CEP164P1-201ENST00000455142 418 ntBASIC14.37□□□□□ -0.11
CSNK1G3Q9Y6M4 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC14.37□□□□□ -0.11
CSNK1G3Q9Y6M4 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC14.37□□□□□ -0.11
CSNK1G3Q9Y6M4 AC019193.1-201ENST00000506678 823 ntBASIC14.37□□□□□ -0.11
CSNK1G3Q9Y6M4 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC14.37□□□□□ -0.11
CSNK1G3Q9Y6M4 RBM8B-201ENST00000555532 525 ntBASIC14.37□□□□□ -0.11
CSNK1G3Q9Y6M4 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC14.37□□□□□ -0.11
CSNK1G3Q9Y6M4 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC14.37□□□□□ -0.11
CSNK1G3Q9Y6M4 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC14.37□□□□□ -0.11
CSNK1G3Q9Y6M4 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC14.37□□□□□ -0.11
CSNK1G3Q9Y6M4 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC14.37□□□□□ -0.11
CSNK1G3Q9Y6M4 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSNK1G3Q9Y6M4 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSNK1G3Q9Y6M4 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.37□□□□□ -0.11
CSNK1G3Q9Y6M4 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.37□□□□□ -0.11
CSNK1G3Q9Y6M4 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSNK1G3Q9Y6M4 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.37□□□□□ -0.11
CSNK1G3Q9Y6M4 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSNK1G3Q9Y6M4 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
CSNK1G3Q9Y6M4 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CSNK1G3Q9Y6M4 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.37□□□□□ -0.11
CSNK1G3Q9Y6M4 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.37□□□□□ -0.11
CSNK1G3Q9Y6M4 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.37□□□□□ -0.11
CSNK1G3Q9Y6M4 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CSNK1G3Q9Y6M4 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSNK1G3Q9Y6M4 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CSNK1G3Q9Y6M4 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CSNK1G3Q9Y6M4 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CSNK1G3Q9Y6M4 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CSNK1G3Q9Y6M4 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CSNK1G3Q9Y6M4 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CSNK1G3Q9Y6M4 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CSNK1G3Q9Y6M4 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CSNK1G3Q9Y6M4 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CSNK1G3Q9Y6M4 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CSNK1G3Q9Y6M4 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
CSNK1G3Q9Y6M4 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CSNK1G3Q9Y6M4 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.36□□□□□ -0.11
CSNK1G3Q9Y6M4 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CSNK1G3Q9Y6M4 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CSNK1G3Q9Y6M4 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CSNK1G3Q9Y6M4 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CSNK1G3Q9Y6M4 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CSNK1G3Q9Y6M4 UFM1-202ENST00000379649 846 ntTSL 4 BASIC14.36□□□□□ -0.11
CSNK1G3Q9Y6M4 AC026316.1-201ENST00000398900 414 ntBASIC14.36□□□□□ -0.11
CSNK1G3Q9Y6M4 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC14.36□□□□□ -0.11
CSNK1G3Q9Y6M4 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC14.36□□□□□ -0.11
CSNK1G3Q9Y6M4 PFN2-206ENST00000461930 606 ntTSL 4 BASIC14.36□□□□□ -0.11
CSNK1G3Q9Y6M4 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC14.36□□□□□ -0.11
CSNK1G3Q9Y6M4 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC14.36□□□□□ -0.11
CSNK1G3Q9Y6M4 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC14.36□□□□□ -0.11
CSNK1G3Q9Y6M4 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC14.36□□□□□ -0.11
CSNK1G3Q9Y6M4 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC14.36□□□□□ -0.11
CSNK1G3Q9Y6M4 NAT9-211ENST00000580632 799 ntTSL 3 BASIC14.36□□□□□ -0.11
CSNK1G3Q9Y6M4 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC14.36□□□□□ -0.11
CSNK1G3Q9Y6M4 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC14.36□□□□□ -0.11
CSNK1G3Q9Y6M4 AL157813.1-201ENST00000612996 587 ntBASIC14.36□□□□□ -0.11
CSNK1G3Q9Y6M4 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CSNK1G3Q9Y6M4 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
CSNK1G3Q9Y6M4 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CSNK1G3Q9Y6M4 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CSNK1G3Q9Y6M4 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CSNK1G3Q9Y6M4 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CSNK1G3Q9Y6M4 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.36□□□□□ -0.11
CSNK1G3Q9Y6M4 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CSNK1G3Q9Y6M4 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CSNK1G3Q9Y6M4 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.36□□□□□ -0.11
CSNK1G3Q9Y6M4 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CSNK1G3Q9Y6M4 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CSNK1G3Q9Y6M4 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CSNK1G3Q9Y6M4 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CSNK1G3Q9Y6M4 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CSNK1G3Q9Y6M4 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CSNK1G3Q9Y6M4 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CSNK1G3Q9Y6M4 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CSNK1G3Q9Y6M4 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSNK1G3Q9Y6M4 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.35□□□□□ -0.11
CSNK1G3Q9Y6M4 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.35□□□□□ -0.11
CSNK1G3Q9Y6M4 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSNK1G3Q9Y6M4 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSNK1G3Q9Y6M4 AC007686.3-201ENST00000619017 3487 ntBASIC14.35□□□□□ -0.11
CSNK1G3Q9Y6M4 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CSNK1G3Q9Y6M4 MYO15B-237ENST00000642007 4893 ntBASIC14.35□□□□□ -0.11
CSNK1G3Q9Y6M4 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSNK1G3Q9Y6M4 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSNK1G3Q9Y6M4 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CSNK1G3Q9Y6M4 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CSNK1G3Q9Y6M4 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
CSNK1G3Q9Y6M4 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSNK1G3Q9Y6M4 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSNK1G3Q9Y6M4 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSNK1G3Q9Y6M4 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSNK1G3Q9Y6M4 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms