Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LRCH1Q9Y2L9 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
LRCH1Q9Y2L9 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
LRCH1Q9Y2L9 AL355102.3-201ENST00000554299 1678 ntBASIC14.02□□□□□ -0.16
LRCH1Q9Y2L9 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
LRCH1Q9Y2L9 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
LRCH1Q9Y2L9 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LRCH1Q9Y2L9 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LRCH1Q9Y2L9 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LRCH1Q9Y2L9 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.02□□□□□ -0.16
LRCH1Q9Y2L9 CEND1P1-201ENST00000451006 455 ntBASIC14.02□□□□□ -0.17
LRCH1Q9Y2L9 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LRCH1Q9Y2L9 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.02□□□□□ -0.17
LRCH1Q9Y2L9 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
LRCH1Q9Y2L9 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.02□□□□□ -0.17
LRCH1Q9Y2L9 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.02□□□□□ -0.17
LRCH1Q9Y2L9 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LRCH1Q9Y2L9 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.02□□□□□ -0.17
LRCH1Q9Y2L9 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.02□□□□□ -0.17
LRCH1Q9Y2L9 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.02□□□□□ -0.17
LRCH1Q9Y2L9 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
LRCH1Q9Y2L9 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.02□□□□□ -0.17
LRCH1Q9Y2L9 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.02□□□□□ -0.17
LRCH1Q9Y2L9 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LRCH1Q9Y2L9 AC055717.3-201ENST00000622967 595 ntBASIC14.02□□□□□ -0.17
LRCH1Q9Y2L9 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.02□□□□□ -0.17
LRCH1Q9Y2L9 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LRCH1Q9Y2L9 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
LRCH1Q9Y2L9 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
LRCH1Q9Y2L9 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LRCH1Q9Y2L9 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
LRCH1Q9Y2L9 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
LRCH1Q9Y2L9 STK3-218ENST00000617590 2485 ntTSL 5 BASIC14.02□□□□□ -0.17
LRCH1Q9Y2L9 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
LRCH1Q9Y2L9 FAM90A11P-201ENST00000518378 2218 ntBASIC14.02□□□□□ -0.17
LRCH1Q9Y2L9 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
LRCH1Q9Y2L9 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LRCH1Q9Y2L9 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LRCH1Q9Y2L9 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LRCH1Q9Y2L9 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LRCH1Q9Y2L9 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LRCH1Q9Y2L9 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.02□□□□□ -0.17
LRCH1Q9Y2L9 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRCH1Q9Y2L9 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRCH1Q9Y2L9 F2-205ENST00000530231 1849 ntTSL 5 BASIC14.01□□□□□ -0.17
LRCH1Q9Y2L9 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LRCH1Q9Y2L9 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
LRCH1Q9Y2L9 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRCH1Q9Y2L9 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LRCH1Q9Y2L9 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC14.01□□□□□ -0.17
LRCH1Q9Y2L9 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LRCH1Q9Y2L9 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
LRCH1Q9Y2L9 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
LRCH1Q9Y2L9 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRCH1Q9Y2L9 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.01□□□□□ -0.17
LRCH1Q9Y2L9 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRCH1Q9Y2L9 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.01□□□□□ -0.17
LRCH1Q9Y2L9 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRCH1Q9Y2L9 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRCH1Q9Y2L9 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
LRCH1Q9Y2L9 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRCH1Q9Y2L9 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRCH1Q9Y2L9 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LRCH1Q9Y2L9 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LRCH1Q9Y2L9 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRCH1Q9Y2L9 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
LRCH1Q9Y2L9 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
LRCH1Q9Y2L9 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.01□□□□□ -0.17
LRCH1Q9Y2L9 AC254562.1-201ENST00000417586 456 ntBASIC14.01□□□□□ -0.17
LRCH1Q9Y2L9 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.01□□□□□ -0.17
LRCH1Q9Y2L9 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.01□□□□□ -0.17
LRCH1Q9Y2L9 AC140658.5-201ENST00000438532 169 ntBASIC14.01□□□□□ -0.17
LRCH1Q9Y2L9 AC098859.1-201ENST00000502915 1238 ntBASIC14.01□□□□□ -0.17
LRCH1Q9Y2L9 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14.01□□□□□ -0.17
LRCH1Q9Y2L9 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.01□□□□□ -0.17
LRCH1Q9Y2L9 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.01□□□□□ -0.17
LRCH1Q9Y2L9 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.01□□□□□ -0.17
LRCH1Q9Y2L9 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.01□□□□□ -0.17
LRCH1Q9Y2L9 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.01□□□□□ -0.17
LRCH1Q9Y2L9 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.01□□□□□ -0.17
LRCH1Q9Y2L9 AL009183.1-201ENST00000603760 355 ntBASIC14.01□□□□□ -0.17
LRCH1Q9Y2L9 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
LRCH1Q9Y2L9 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC14.01□□□□□ -0.17
LRCH1Q9Y2L9 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
LRCH1Q9Y2L9 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRCH1Q9Y2L9 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
LRCH1Q9Y2L9 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC14.01□□□□□ -0.17
LRCH1Q9Y2L9 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRCH1Q9Y2L9 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
LRCH1Q9Y2L9 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LRCH1Q9Y2L9 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRCH1Q9Y2L9 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRCH1Q9Y2L9 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC14.01□□□□□ -0.17
LRCH1Q9Y2L9 AC010970.1-201ENST00000445125 1848 ntBASIC14.01□□□□□ -0.17
LRCH1Q9Y2L9 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.01□□□□□ -0.17
LRCH1Q9Y2L9 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRCH1Q9Y2L9 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LRCH1Q9Y2L9 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRCH1Q9Y2L9 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRCH1Q9Y2L9 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms