Protein–RNA interactions for Protein: Q9UQL6

HDAC5, Histone deacetylase 5, humanhuman

Predictions only

Length 1,122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5Q9UQL6 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HDAC5Q9UQL6 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HDAC5Q9UQL6 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HDAC5Q9UQL6 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HDAC5Q9UQL6 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
HDAC5Q9UQL6 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HDAC5Q9UQL6 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HDAC5Q9UQL6 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
HDAC5Q9UQL6 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
HDAC5Q9UQL6 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HDAC5Q9UQL6 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC18.29■□□□□ 0.52
HDAC5Q9UQL6 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HDAC5Q9UQL6 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HDAC5Q9UQL6 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HDAC5Q9UQL6 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC18.29■□□□□ 0.52
HDAC5Q9UQL6 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC18.29■□□□□ 0.52
HDAC5Q9UQL6 CCNC-217ENST00000523985 958 ntTSL 2 BASIC18.29■□□□□ 0.52
HDAC5Q9UQL6 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC18.29■□□□□ 0.52
HDAC5Q9UQL6 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HDAC5Q9UQL6 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC18.29■□□□□ 0.52
HDAC5Q9UQL6 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC18.29■□□□□ 0.52
HDAC5Q9UQL6 PCBP2-OT1-201ENST00000634357 590 ntBASIC18.29■□□□□ 0.52
HDAC5Q9UQL6 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC18.29■□□□□ 0.52
HDAC5Q9UQL6 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HDAC5Q9UQL6 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC18.29■□□□□ 0.52
HDAC5Q9UQL6 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
HDAC5Q9UQL6 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
HDAC5Q9UQL6 AP002414.2-201ENST00000591780 3365 ntBASIC18.29■□□□□ 0.52
HDAC5Q9UQL6 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HDAC5Q9UQL6 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
HDAC5Q9UQL6 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC18.29■□□□□ 0.52
HDAC5Q9UQL6 INTS4P1-203ENST00000641008 3683 ntBASIC18.29■□□□□ 0.52
HDAC5Q9UQL6 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HDAC5Q9UQL6 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HDAC5Q9UQL6 FAS-202ENST00000352159 1722 ntTSL 5 BASIC18.29■□□□□ 0.52
HDAC5Q9UQL6 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
HDAC5Q9UQL6 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HDAC5Q9UQL6 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HDAC5Q9UQL6 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HDAC5Q9UQL6 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HDAC5Q9UQL6 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HDAC5Q9UQL6 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HDAC5Q9UQL6 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC18.28■□□□□ 0.52
HDAC5Q9UQL6 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HDAC5Q9UQL6 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
HDAC5Q9UQL6 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HDAC5Q9UQL6 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
HDAC5Q9UQL6 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HDAC5Q9UQL6 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC18.28■□□□□ 0.52
HDAC5Q9UQL6 VDAC1P1-201ENST00000439229 848 ntBASIC18.28■□□□□ 0.52
HDAC5Q9UQL6 AC006122.1-201ENST00000493323 440 ntBASIC18.28■□□□□ 0.52
HDAC5Q9UQL6 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC18.28■□□□□ 0.52
HDAC5Q9UQL6 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC18.28■□□□□ 0.52
HDAC5Q9UQL6 MIR4525-201ENST00000580000 75 ntBASIC18.28■□□□□ 0.52
HDAC5Q9UQL6 AC020914.3-201ENST00000594712 304 ntBASIC18.28■□□□□ 0.52
HDAC5Q9UQL6 AL132994.2-201ENST00000603120 687 ntBASIC18.28■□□□□ 0.52
HDAC5Q9UQL6 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC18.28■□□□□ 0.52
HDAC5Q9UQL6 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC18.28■□□□□ 0.52
HDAC5Q9UQL6 AC138649.2-201ENST00000615886 705 ntBASIC18.28■□□□□ 0.52
HDAC5Q9UQL6 AC100757.4-201ENST00000626934 759 ntBASIC18.28■□□□□ 0.52
HDAC5Q9UQL6 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HDAC5Q9UQL6 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HDAC5Q9UQL6 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HDAC5Q9UQL6 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
HDAC5Q9UQL6 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HDAC5Q9UQL6 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC18.28■□□□□ 0.52
HDAC5Q9UQL6 AC092053.3-201ENST00000641308 4975 ntBASIC18.28■□□□□ 0.52
HDAC5Q9UQL6 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HDAC5Q9UQL6 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HDAC5Q9UQL6 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
HDAC5Q9UQL6 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC18.28■□□□□ 0.52
HDAC5Q9UQL6 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HDAC5Q9UQL6 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
HDAC5Q9UQL6 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HDAC5Q9UQL6 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HDAC5Q9UQL6 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HDAC5Q9UQL6 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
HDAC5Q9UQL6 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
HDAC5Q9UQL6 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC18.27■□□□□ 0.52
HDAC5Q9UQL6 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC18.27■□□□□ 0.52
HDAC5Q9UQL6 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC18.27■□□□□ 0.52
HDAC5Q9UQL6 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC18.27■□□□□ 0.52
HDAC5Q9UQL6 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HDAC5Q9UQL6 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HDAC5Q9UQL6 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HDAC5Q9UQL6 AC140479.7-201ENST00000636301 2332 ntBASIC18.27■□□□□ 0.52
HDAC5Q9UQL6 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HDAC5Q9UQL6 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
HDAC5Q9UQL6 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HDAC5Q9UQL6 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HDAC5Q9UQL6 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
HDAC5Q9UQL6 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
HDAC5Q9UQL6 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
HDAC5Q9UQL6 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HDAC5Q9UQL6 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HDAC5Q9UQL6 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC18.27■□□□□ 0.52
HDAC5Q9UQL6 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.52
HDAC5Q9UQL6 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
HDAC5Q9UQL6 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC18.27■□□□□ 0.52
HDAC5Q9UQL6 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms