Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC20.52■□□□□ 0.88
SLC52A1Q9NWF4 CISD2-202ENST00000503643 808 ntTSL 2 BASIC20.52■□□□□ 0.88
SLC52A1Q9NWF4 SLC25A15P3-201ENST00000505530 290 ntBASIC20.52■□□□□ 0.88
SLC52A1Q9NWF4 KRT18P37-201ENST00000520711 1282 ntBASIC20.52■□□□□ 0.88
SLC52A1Q9NWF4 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
SLC52A1Q9NWF4 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC20.52■□□□□ 0.88
SLC52A1Q9NWF4 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC20.52■□□□□ 0.88
SLC52A1Q9NWF4 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC52A1Q9NWF4 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC52A1Q9NWF4 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC20.52■□□□□ 0.88
SLC52A1Q9NWF4 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC52A1Q9NWF4 CICP6-201ENST00000457191 2729 ntBASIC20.52■□□□□ 0.87
SLC52A1Q9NWF4 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC52A1Q9NWF4 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC52A1Q9NWF4 LINC00554-201ENST00000564841 3011 ntBASIC20.51■□□□□ 0.87
SLC52A1Q9NWF4 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC52A1Q9NWF4 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC20.51■□□□□ 0.87
SLC52A1Q9NWF4 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SLC52A1Q9NWF4 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC52A1Q9NWF4 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC20.51■□□□□ 0.87
SLC52A1Q9NWF4 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
SLC52A1Q9NWF4 ACTBP7-201ENST00000418351 1124 ntBASIC20.51■□□□□ 0.87
SLC52A1Q9NWF4 VENTXP4-201ENST00000449029 958 ntBASIC20.51■□□□□ 0.87
SLC52A1Q9NWF4 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC20.51■□□□□ 0.87
SLC52A1Q9NWF4 DLK1-205ENST00000556051 469 ntTSL 2 BASIC20.51■□□□□ 0.87
SLC52A1Q9NWF4 SRP14-204ENST00000558720 780 ntTSL 2 BASIC20.51■□□□□ 0.87
SLC52A1Q9NWF4 CES1P2-201ENST00000566467 1242 ntBASIC20.51■□□□□ 0.87
SLC52A1Q9NWF4 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC20.51■□□□□ 0.87
SLC52A1Q9NWF4 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
SLC52A1Q9NWF4 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
SLC52A1Q9NWF4 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC20.51■□□□□ 0.87
SLC52A1Q9NWF4 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
SLC52A1Q9NWF4 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC52A1Q9NWF4 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC20.51■□□□□ 0.87
SLC52A1Q9NWF4 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC20.51■□□□□ 0.87
SLC52A1Q9NWF4 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC52A1Q9NWF4 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC20.51■□□□□ 0.87
SLC52A1Q9NWF4 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC52A1Q9NWF4 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC20.5■□□□□ 0.87
SLC52A1Q9NWF4 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC52A1Q9NWF4 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SLC52A1Q9NWF4 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC52A1Q9NWF4 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC20.5■□□□□ 0.87
SLC52A1Q9NWF4 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC20.5■□□□□ 0.87
SLC52A1Q9NWF4 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC20.5■□□□□ 0.87
SLC52A1Q9NWF4 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC52A1Q9NWF4 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC52A1Q9NWF4 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
SLC52A1Q9NWF4 AP000354.1-201ENST00000396982 456 ntBASIC20.5■□□□□ 0.87
SLC52A1Q9NWF4 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC52A1Q9NWF4 HLA-DPA2-205ENST00000433582 733 ntBASIC20.5■□□□□ 0.87
SLC52A1Q9NWF4 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC52A1Q9NWF4 AL451000.1-201ENST00000451300 1186 ntBASIC20.5■□□□□ 0.87
SLC52A1Q9NWF4 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC20.5■□□□□ 0.87
SLC52A1Q9NWF4 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
SLC52A1Q9NWF4 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SLC52A1Q9NWF4 EEF1GP8-201ENST00000506566 1154 ntBASIC20.5■□□□□ 0.87
SLC52A1Q9NWF4 AL512310.5-201ENST00000551999 515 ntBASIC20.5■□□□□ 0.87
SLC52A1Q9NWF4 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC20.5■□□□□ 0.87
SLC52A1Q9NWF4 AL139339.2-201ENST00000608063 657 ntBASIC20.5■□□□□ 0.87
SLC52A1Q9NWF4 COQ4-204ENST00000608951 781 ntTSL 2 BASIC20.5■□□□□ 0.87
SLC52A1Q9NWF4 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC52A1Q9NWF4 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC52A1Q9NWF4 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
SLC52A1Q9NWF4 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
SLC52A1Q9NWF4 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SLC52A1Q9NWF4 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC52A1Q9NWF4 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC52A1Q9NWF4 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC20.5■□□□□ 0.87
SLC52A1Q9NWF4 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
SLC52A1Q9NWF4 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLC52A1Q9NWF4 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC20.49■□□□□ 0.87
SLC52A1Q9NWF4 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
SLC52A1Q9NWF4 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
SLC52A1Q9NWF4 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC20.49■□□□□ 0.87
SLC52A1Q9NWF4 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLC52A1Q9NWF4 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLC52A1Q9NWF4 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SLC52A1Q9NWF4 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
SLC52A1Q9NWF4 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SLC52A1Q9NWF4 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLC52A1Q9NWF4 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC20.49■□□□□ 0.87
SLC52A1Q9NWF4 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC20.49■□□□□ 0.87
SLC52A1Q9NWF4 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC20.49■□□□□ 0.87
SLC52A1Q9NWF4 RBM4-207ENST00000506523 654 ntTSL 3 BASIC20.49■□□□□ 0.87
SLC52A1Q9NWF4 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC20.49■□□□□ 0.87
SLC52A1Q9NWF4 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC20.49■□□□□ 0.87
SLC52A1Q9NWF4 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC20.49■□□□□ 0.87
SLC52A1Q9NWF4 AC092862.1-201ENST00000541534 533 ntBASIC20.49■□□□□ 0.87
SLC52A1Q9NWF4 BATF-202ENST00000555504 361 ntTSL 2 BASIC20.49■□□□□ 0.87
SLC52A1Q9NWF4 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SLC52A1Q9NWF4 ABHD17AP9-201ENST00000561925 548 ntBASIC20.49■□□□□ 0.87
SLC52A1Q9NWF4 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC20.49■□□□□ 0.87
SLC52A1Q9NWF4 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC20.49■□□□□ 0.87
SLC52A1Q9NWF4 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC20.49■□□□□ 0.87
SLC52A1Q9NWF4 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SLC52A1Q9NWF4 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
SLC52A1Q9NWF4 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
SLC52A1Q9NWF4 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC20.49■□□□□ 0.87
SLC52A1Q9NWF4 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms