Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 HLA-K-203ENST00000430151 1046 ntBASIC14.06□□□□□ -0.16
CCM2LQ9NUG4 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.06□□□□□ -0.16
CCM2LQ9NUG4 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC14.06□□□□□ -0.16
CCM2LQ9NUG4 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC14.06□□□□□ -0.16
CCM2LQ9NUG4 DOC2GP-202ENST00000514950 1163 ntBASIC14.06□□□□□ -0.16
CCM2LQ9NUG4 AC092552.1-201ENST00000547243 906 ntBASIC14.06□□□□□ -0.16
CCM2LQ9NUG4 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.06□□□□□ -0.16
CCM2LQ9NUG4 AC000095.1-201ENST00000603208 874 ntBASIC14.06□□□□□ -0.16
CCM2LQ9NUG4 AC007431.3-201ENST00000623221 587 ntBASIC14.06□□□□□ -0.16
CCM2LQ9NUG4 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC14.06□□□□□ -0.16
CCM2LQ9NUG4 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCM2LQ9NUG4 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
CCM2LQ9NUG4 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCM2LQ9NUG4 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCM2LQ9NUG4 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCM2LQ9NUG4 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCM2LQ9NUG4 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCM2LQ9NUG4 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCM2LQ9NUG4 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCM2LQ9NUG4 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCM2LQ9NUG4 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.06□□□□□ -0.16
CCM2LQ9NUG4 AC215219.1-201ENST00000400706 1817 ntBASIC14.06□□□□□ -0.16
CCM2LQ9NUG4 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCM2LQ9NUG4 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCM2LQ9NUG4 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
CCM2LQ9NUG4 CLK3P2-201ENST00000427566 1453 ntBASIC14.06□□□□□ -0.16
CCM2LQ9NUG4 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC14.05□□□□□ -0.16
CCM2LQ9NUG4 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CCM2LQ9NUG4 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CCM2LQ9NUG4 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
CCM2LQ9NUG4 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CCM2LQ9NUG4 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCM2LQ9NUG4 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CCM2LQ9NUG4 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CCM2LQ9NUG4 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCM2LQ9NUG4 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CCM2LQ9NUG4 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC14.05□□□□□ -0.16
CCM2LQ9NUG4 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
CCM2LQ9NUG4 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC14.05□□□□□ -0.16
CCM2LQ9NUG4 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCM2LQ9NUG4 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCM2LQ9NUG4 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCM2LQ9NUG4 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCM2LQ9NUG4 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CCM2LQ9NUG4 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCM2LQ9NUG4 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.05□□□□□ -0.16
CCM2LQ9NUG4 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.05□□□□□ -0.16
CCM2LQ9NUG4 TTTY23B-201ENST00000442790 549 ntBASIC14.05□□□□□ -0.16
CCM2LQ9NUG4 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CCM2LQ9NUG4 AL079307.3-201ENST00000556114 283 ntBASIC14.05□□□□□ -0.16
CCM2LQ9NUG4 MIR4525-201ENST00000580000 75 ntBASIC14.05□□□□□ -0.16
CCM2LQ9NUG4 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.05□□□□□ -0.16
CCM2LQ9NUG4 APOC4-201ENST00000591600 348 ntTSL 3 BASIC14.05□□□□□ -0.16
CCM2LQ9NUG4 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CCM2LQ9NUG4 LINC01115-203ENST00000606068 577 ntBASIC14.05□□□□□ -0.16
CCM2LQ9NUG4 MIR6074-201ENST00000612054 107 ntBASIC14.05□□□□□ -0.16
CCM2LQ9NUG4 AL033527.4-201ENST00000641026 673 ntBASIC14.05□□□□□ -0.16
CCM2LQ9NUG4 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCM2LQ9NUG4 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.05□□□□□ -0.16
CCM2LQ9NUG4 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CCM2LQ9NUG4 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC14.05□□□□□ -0.16
CCM2LQ9NUG4 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCM2LQ9NUG4 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC14.05□□□□□ -0.16
CCM2LQ9NUG4 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCM2LQ9NUG4 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CCM2LQ9NUG4 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CCM2LQ9NUG4 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.05□□□□□ -0.16
CCM2LQ9NUG4 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCM2LQ9NUG4 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCM2LQ9NUG4 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCM2LQ9NUG4 BTBD7P1-201ENST00000447253 1453 ntBASIC14.05□□□□□ -0.16
CCM2LQ9NUG4 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCM2LQ9NUG4 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CCM2LQ9NUG4 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCM2LQ9NUG4 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CCM2LQ9NUG4 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCM2LQ9NUG4 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CCM2LQ9NUG4 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCM2LQ9NUG4 AC083964.2-201ENST00000623988 2396 ntBASIC14.04□□□□□ -0.16
CCM2LQ9NUG4 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCM2LQ9NUG4 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC14.04□□□□□ -0.16
CCM2LQ9NUG4 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CCM2LQ9NUG4 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCM2LQ9NUG4 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCM2LQ9NUG4 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCM2LQ9NUG4 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CCM2LQ9NUG4 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
CCM2LQ9NUG4 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC14.04□□□□□ -0.16
CCM2LQ9NUG4 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCM2LQ9NUG4 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
CCM2LQ9NUG4 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CCM2LQ9NUG4 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.04□□□□□ -0.16
CCM2LQ9NUG4 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC14.04□□□□□ -0.16
CCM2LQ9NUG4 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.04□□□□□ -0.16
CCM2LQ9NUG4 AC093004.1-201ENST00000508850 424 ntBASIC14.04□□□□□ -0.16
CCM2LQ9NUG4 FAM8A2P-201ENST00000528813 1142 ntBASIC14.04□□□□□ -0.16
CCM2LQ9NUG4 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC14.04□□□□□ -0.16
CCM2LQ9NUG4 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC14.04□□□□□ -0.16
CCM2LQ9NUG4 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.04□□□□□ -0.16
CCM2LQ9NUG4 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms