Protein–RNA interactions for Protein: Q9NPI1

BRD7, Bromodomain-containing protein 7, humanhuman

Predictions only

Length 651 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD7Q9NPI1 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
BRD7Q9NPI1 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
BRD7Q9NPI1 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
BRD7Q9NPI1 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
BRD7Q9NPI1 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
BRD7Q9NPI1 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
BRD7Q9NPI1 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.29□□□□□ -0.28
BRD7Q9NPI1 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC13.29□□□□□ -0.28
BRD7Q9NPI1 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
BRD7Q9NPI1 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
BRD7Q9NPI1 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.29□□□□□ -0.28
BRD7Q9NPI1 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
BRD7Q9NPI1 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.29□□□□□ -0.28
BRD7Q9NPI1 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
BRD7Q9NPI1 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
BRD7Q9NPI1 SPDYE19P-201ENST00000338590 713 ntBASIC13.29□□□□□ -0.28
BRD7Q9NPI1 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
BRD7Q9NPI1 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.29□□□□□ -0.28
BRD7Q9NPI1 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.29□□□□□ -0.28
BRD7Q9NPI1 BASP1P1-201ENST00000430708 665 ntBASIC13.29□□□□□ -0.28
BRD7Q9NPI1 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
BRD7Q9NPI1 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.29□□□□□ -0.28
BRD7Q9NPI1 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.29□□□□□ -0.28
BRD7Q9NPI1 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC13.29□□□□□ -0.28
BRD7Q9NPI1 DOC2GP-202ENST00000514950 1163 ntBASIC13.29□□□□□ -0.28
BRD7Q9NPI1 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.29□□□□□ -0.28
BRD7Q9NPI1 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
BRD7Q9NPI1 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.29□□□□□ -0.28
BRD7Q9NPI1 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.29□□□□□ -0.28
BRD7Q9NPI1 ARL16-202ENST00000570561 768 ntTSL 2 BASIC13.29□□□□□ -0.28
BRD7Q9NPI1 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC13.29□□□□□ -0.28
BRD7Q9NPI1 AP001542.1-201ENST00000591314 200 ntBASIC13.29□□□□□ -0.28
BRD7Q9NPI1 RNA5-8SN1-201ENST00000610460 153 ntBASIC13.29□□□□□ -0.28
BRD7Q9NPI1 RNA5-8SN5-202ENST00000612463 153 ntBASIC13.29□□□□□ -0.28
BRD7Q9NPI1 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.29□□□□□ -0.28
BRD7Q9NPI1 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.29□□□□□ -0.28
BRD7Q9NPI1 AC092723.2-201ENST00000624955 793 ntBASIC13.29□□□□□ -0.28
BRD7Q9NPI1 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
BRD7Q9NPI1 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
BRD7Q9NPI1 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
BRD7Q9NPI1 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.29□□□□□ -0.28
BRD7Q9NPI1 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
BRD7Q9NPI1 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
BRD7Q9NPI1 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
BRD7Q9NPI1 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.29□□□□□ -0.28
BRD7Q9NPI1 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.29□□□□□ -0.28
BRD7Q9NPI1 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
BRD7Q9NPI1 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
BRD7Q9NPI1 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
BRD7Q9NPI1 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
BRD7Q9NPI1 DRD5P1-201ENST00000456605 1438 ntBASIC13.29□□□□□ -0.28
BRD7Q9NPI1 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
BRD7Q9NPI1 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.29□□□□□ -0.28
BRD7Q9NPI1 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC13.29□□□□□ -0.28
BRD7Q9NPI1 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
BRD7Q9NPI1 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.29□□□□□ -0.28
BRD7Q9NPI1 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.28□□□□□ -0.28
BRD7Q9NPI1 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
BRD7Q9NPI1 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
BRD7Q9NPI1 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC13.28□□□□□ -0.28
BRD7Q9NPI1 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
BRD7Q9NPI1 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
BRD7Q9NPI1 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
BRD7Q9NPI1 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
BRD7Q9NPI1 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
BRD7Q9NPI1 AL138799.1-201ENST00000448213 1675 ntBASIC13.28□□□□□ -0.28
BRD7Q9NPI1 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
BRD7Q9NPI1 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
BRD7Q9NPI1 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC13.28□□□□□ -0.28
BRD7Q9NPI1 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.28□□□□□ -0.28
BRD7Q9NPI1 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
BRD7Q9NPI1 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
BRD7Q9NPI1 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.28□□□□□ -0.28
BRD7Q9NPI1 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.28□□□□□ -0.28
BRD7Q9NPI1 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
BRD7Q9NPI1 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
BRD7Q9NPI1 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
BRD7Q9NPI1 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
BRD7Q9NPI1 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.28□□□□□ -0.28
BRD7Q9NPI1 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.28□□□□□ -0.28
BRD7Q9NPI1 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
BRD7Q9NPI1 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC13.28□□□□□ -0.28
BRD7Q9NPI1 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
BRD7Q9NPI1 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.28□□□□□ -0.28
BRD7Q9NPI1 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
BRD7Q9NPI1 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.28□□□□□ -0.28
BRD7Q9NPI1 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
BRD7Q9NPI1 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC13.28□□□□□ -0.28
BRD7Q9NPI1 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.28□□□□□ -0.28
BRD7Q9NPI1 GNAQP1-201ENST00000444815 1067 ntBASIC13.28□□□□□ -0.28
BRD7Q9NPI1 RN7SL399P-201ENST00000471648 279 ntBASIC13.28□□□□□ -0.28
BRD7Q9NPI1 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC13.28□□□□□ -0.28
BRD7Q9NPI1 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.28□□□□□ -0.28
BRD7Q9NPI1 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
BRD7Q9NPI1 AL139317.3-201ENST00000555969 898 ntTSL 2 BASIC13.28□□□□□ -0.28
BRD7Q9NPI1 RARRES2P5-201ENST00000564013 466 ntBASIC13.28□□□□□ -0.28
BRD7Q9NPI1 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.28□□□□□ -0.28
BRD7Q9NPI1 AL390955.2-201ENST00000603032 514 ntBASIC13.28□□□□□ -0.28
BRD7Q9NPI1 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
BRD7Q9NPI1 AC004790.1-201ENST00000612686 536 ntBASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 162.9 ms