Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 AC105339.1-204ENST00000636249 355 ntBASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 AL033527.5-202ENST00000641632 1098 ntBASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 CETN4P-206ENST00000642099 2168 ntBASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 PASK-203ENST00000403638 5161 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 GPR173-201ENST00000332582 4485 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 AC020910.6-201ENST00000623084 1459 ntBASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 RALGPS1-201ENST00000259351 6336 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 SETD1B-204ENST00000619791 5901 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
SND1-IT1Q9HBX3 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
SND1-IT1Q9HBX3 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
SND1-IT1Q9HBX3 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC9.9□□□□□ -0.82
SND1-IT1Q9HBX3 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
SND1-IT1Q9HBX3 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SND1-IT1Q9HBX3 SEC24B-201ENST00000265175 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
SND1-IT1Q9HBX3 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
SND1-IT1Q9HBX3 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC9.9□□□□□ -0.82
SND1-IT1Q9HBX3 DOT1L-201ENST00000398665 7436 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SND1-IT1Q9HBX3 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
SND1-IT1Q9HBX3 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
SND1-IT1Q9HBX3 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
SND1-IT1Q9HBX3 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SND1-IT1Q9HBX3 ABR-202ENST00000302538 5289 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SND1-IT1Q9HBX3 ST8SIA1-203ENST00000396037 9714 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SND1-IT1Q9HBX3 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
SND1-IT1Q9HBX3 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC9.9□□□□□ -0.82
SND1-IT1Q9HBX3 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SND1-IT1Q9HBX3 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
SND1-IT1Q9HBX3 SCN1B-202ENST00000415950 4537 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
SND1-IT1Q9HBX3 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
SND1-IT1Q9HBX3 CACNA1G-207ENST00000429973 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
SND1-IT1Q9HBX3 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
SND1-IT1Q9HBX3 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SND1-IT1Q9HBX3 ARHGEF10L-202ENST00000361221 4488 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
SND1-IT1Q9HBX3 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SND1-IT1Q9HBX3 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
SND1-IT1Q9HBX3 NR3C2-203ENST00000358102 5893 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SND1-IT1Q9HBX3 AC020658.7-201ENST00000624274 2442 ntBASIC9.9□□□□□ -0.82
SND1-IT1Q9HBX3 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC9.9□□□□□ -0.82
SND1-IT1Q9HBX3 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SND1-IT1Q9HBX3 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
SND1-IT1Q9HBX3 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
SND1-IT1Q9HBX3 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SND1-IT1Q9HBX3 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
SND1-IT1Q9HBX3 AL627223.1-201ENST00000416693 442 ntBASIC9.9□□□□□ -0.82
SND1-IT1Q9HBX3 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SND1-IT1Q9HBX3 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC9.9□□□□□ -0.82
SND1-IT1Q9HBX3 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
SND1-IT1Q9HBX3 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC9.9□□□□□ -0.82
SND1-IT1Q9HBX3 AC004066.1-201ENST00000502488 802 ntBASIC9.9□□□□□ -0.82
SND1-IT1Q9HBX3 NMU-202ENST00000505262 693 ntTSL 3 BASIC9.9□□□□□ -0.82
SND1-IT1Q9HBX3 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC9.9□□□□□ -0.82
SND1-IT1Q9HBX3 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC9.9□□□□□ -0.82
SND1-IT1Q9HBX3 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC9.9□□□□□ -0.82
SND1-IT1Q9HBX3 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
SND1-IT1Q9HBX3 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC9.9□□□□□ -0.82
SND1-IT1Q9HBX3 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC9.9□□□□□ -0.82
SND1-IT1Q9HBX3 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC9.9□□□□□ -0.82
SND1-IT1Q9HBX3 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
SND1-IT1Q9HBX3 TP73-207ENST00000378290 1831 ntTSL 2 BASIC9.9□□□□□ -0.82
SND1-IT1Q9HBX3 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC9.9□□□□□ -0.82
SND1-IT1Q9HBX3 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
SND1-IT1Q9HBX3 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
SND1-IT1Q9HBX3 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC9.9□□□□□ -0.82
SND1-IT1Q9HBX3 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SND1-IT1Q9HBX3 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC9.9□□□□□ -0.82
SND1-IT1Q9HBX3 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
SND1-IT1Q9HBX3 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
SND1-IT1Q9HBX3 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
SND1-IT1Q9HBX3 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC9.9□□□□□ -0.83
SND1-IT1Q9HBX3 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
SND1-IT1Q9HBX3 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
SND1-IT1Q9HBX3 SMARCA2-209ENST00000382203 5867 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
SND1-IT1Q9HBX3 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC9.9□□□□□ -0.83
SND1-IT1Q9HBX3 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC9.9□□□□□ -0.83
SND1-IT1Q9HBX3 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
SND1-IT1Q9HBX3 CROT-203ENST00000419147 2959 ntTSL 2 BASIC9.9□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms