Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC14.05□□□□□ -0.16
BRF2Q9HAW0 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BRF2Q9HAW0 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
BRF2Q9HAW0 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BRF2Q9HAW0 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.05□□□□□ -0.16
BRF2Q9HAW0 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
BRF2Q9HAW0 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
BRF2Q9HAW0 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
BRF2Q9HAW0 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
BRF2Q9HAW0 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.05□□□□□ -0.16
BRF2Q9HAW0 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
BRF2Q9HAW0 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.05□□□□□ -0.16
BRF2Q9HAW0 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC14.05□□□□□ -0.16
BRF2Q9HAW0 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
BRF2Q9HAW0 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
BRF2Q9HAW0 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
BRF2Q9HAW0 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
BRF2Q9HAW0 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BRF2Q9HAW0 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
BRF2Q9HAW0 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
BRF2Q9HAW0 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.04□□□□□ -0.16
BRF2Q9HAW0 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
BRF2Q9HAW0 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
BRF2Q9HAW0 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
BRF2Q9HAW0 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.04□□□□□ -0.16
BRF2Q9HAW0 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.04□□□□□ -0.16
BRF2Q9HAW0 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
BRF2Q9HAW0 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.04□□□□□ -0.16
BRF2Q9HAW0 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
BRF2Q9HAW0 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.04□□□□□ -0.16
BRF2Q9HAW0 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
BRF2Q9HAW0 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
BRF2Q9HAW0 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
BRF2Q9HAW0 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
BRF2Q9HAW0 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
BRF2Q9HAW0 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
BRF2Q9HAW0 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
BRF2Q9HAW0 AC010141.1-201ENST00000411585 623 ntBASIC14.04□□□□□ -0.16
BRF2Q9HAW0 RGS5-214ENST00000429865 754 ntTSL 3 BASIC14.04□□□□□ -0.16
BRF2Q9HAW0 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
BRF2Q9HAW0 AL161932.2-201ENST00000435436 679 ntBASIC14.04□□□□□ -0.16
BRF2Q9HAW0 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
BRF2Q9HAW0 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
BRF2Q9HAW0 CICP12-201ENST00000455801 843 ntBASIC14.04□□□□□ -0.16
BRF2Q9HAW0 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC14.04□□□□□ -0.16
BRF2Q9HAW0 C2orf69P2-201ENST00000562032 1123 ntBASIC14.04□□□□□ -0.16
BRF2Q9HAW0 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.04□□□□□ -0.16
BRF2Q9HAW0 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC14.04□□□□□ -0.16
BRF2Q9HAW0 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC14.04□□□□□ -0.16
BRF2Q9HAW0 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.04□□□□□ -0.16
BRF2Q9HAW0 PFAS-212ENST00000625942 396 ntTSL 5 BASIC14.04□□□□□ -0.16
BRF2Q9HAW0 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC14.04□□□□□ -0.16
BRF2Q9HAW0 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.04□□□□□ -0.16
BRF2Q9HAW0 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.04□□□□□ -0.16
BRF2Q9HAW0 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.04□□□□□ -0.16
BRF2Q9HAW0 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
BRF2Q9HAW0 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
BRF2Q9HAW0 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
BRF2Q9HAW0 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.04□□□□□ -0.16
BRF2Q9HAW0 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
BRF2Q9HAW0 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
BRF2Q9HAW0 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
BRF2Q9HAW0 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
BRF2Q9HAW0 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
BRF2Q9HAW0 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.04□□□□□ -0.16
BRF2Q9HAW0 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
BRF2Q9HAW0 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
BRF2Q9HAW0 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
BRF2Q9HAW0 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.04□□□□□ -0.16
BRF2Q9HAW0 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
BRF2Q9HAW0 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
BRF2Q9HAW0 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
BRF2Q9HAW0 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
BRF2Q9HAW0 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
BRF2Q9HAW0 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BRF2Q9HAW0 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.03□□□□□ -0.16
BRF2Q9HAW0 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BRF2Q9HAW0 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
BRF2Q9HAW0 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.03□□□□□ -0.16
BRF2Q9HAW0 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
BRF2Q9HAW0 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
BRF2Q9HAW0 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BRF2Q9HAW0 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.03□□□□□ -0.16
BRF2Q9HAW0 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
BRF2Q9HAW0 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
BRF2Q9HAW0 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC14.03□□□□□ -0.16
BRF2Q9HAW0 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.03□□□□□ -0.16
BRF2Q9HAW0 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.03□□□□□ -0.16
BRF2Q9HAW0 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC14.03□□□□□ -0.16
BRF2Q9HAW0 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC14.03□□□□□ -0.16
BRF2Q9HAW0 AP000812.2-201ENST00000538934 718 ntBASIC14.03□□□□□ -0.16
BRF2Q9HAW0 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
BRF2Q9HAW0 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC14.03□□□□□ -0.16
BRF2Q9HAW0 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC14.03□□□□□ -0.16
BRF2Q9HAW0 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.03□□□□□ -0.16
BRF2Q9HAW0 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC14.03□□□□□ -0.16
BRF2Q9HAW0 CECR7-204ENST00000609932 568 ntTSL 2 BASIC14.03□□□□□ -0.16
BRF2Q9HAW0 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC14.03□□□□□ -0.16
BRF2Q9HAW0 RHOXF1P1-202ENST00000635473 501 ntBASIC14.03□□□□□ -0.16
BRF2Q9HAW0 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms