Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.81□□□□□ -0.2
AMBRA1Q9C0C7 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
AMBRA1Q9C0C7 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
AMBRA1Q9C0C7 AC067750.1-201ENST00000608826 6545 ntBASIC13.81□□□□□ -0.2
AMBRA1Q9C0C7 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
AMBRA1Q9C0C7 CETP-203ENST00000566128 1733 ntTSL 5 BASIC13.81□□□□□ -0.2
AMBRA1Q9C0C7 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
AMBRA1Q9C0C7 MYADML-201ENST00000474610 2147 ntBASIC13.81□□□□□ -0.2
AMBRA1Q9C0C7 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
AMBRA1Q9C0C7 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.81□□□□□ -0.2
AMBRA1Q9C0C7 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
AMBRA1Q9C0C7 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
AMBRA1Q9C0C7 AC007541.1-201ENST00000570282 1469 ntBASIC13.8□□□□□ -0.2
AMBRA1Q9C0C7 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
AMBRA1Q9C0C7 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
AMBRA1Q9C0C7 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
AMBRA1Q9C0C7 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
AMBRA1Q9C0C7 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
AMBRA1Q9C0C7 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC13.8□□□□□ -0.2
AMBRA1Q9C0C7 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
AMBRA1Q9C0C7 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
AMBRA1Q9C0C7 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
AMBRA1Q9C0C7 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.8□□□□□ -0.2
AMBRA1Q9C0C7 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.8□□□□□ -0.2
AMBRA1Q9C0C7 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
AMBRA1Q9C0C7 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
AMBRA1Q9C0C7 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
AMBRA1Q9C0C7 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.8□□□□□ -0.2
AMBRA1Q9C0C7 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.8□□□□□ -0.2
AMBRA1Q9C0C7 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
AMBRA1Q9C0C7 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
AMBRA1Q9C0C7 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.8□□□□□ -0.2
AMBRA1Q9C0C7 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
AMBRA1Q9C0C7 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.8□□□□□ -0.2
AMBRA1Q9C0C7 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
AMBRA1Q9C0C7 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13.8□□□□□ -0.2
AMBRA1Q9C0C7 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.8□□□□□ -0.2
AMBRA1Q9C0C7 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.8□□□□□ -0.2
AMBRA1Q9C0C7 BRI3BPP1-201ENST00000594224 787 ntBASIC13.8□□□□□ -0.2
AMBRA1Q9C0C7 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
AMBRA1Q9C0C7 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.8□□□□□ -0.2
AMBRA1Q9C0C7 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
AMBRA1Q9C0C7 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.8□□□□□ -0.2
AMBRA1Q9C0C7 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
AMBRA1Q9C0C7 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
AMBRA1Q9C0C7 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
AMBRA1Q9C0C7 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
AMBRA1Q9C0C7 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
AMBRA1Q9C0C7 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
AMBRA1Q9C0C7 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
AMBRA1Q9C0C7 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
AMBRA1Q9C0C7 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC13.8□□□□□ -0.2
AMBRA1Q9C0C7 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
AMBRA1Q9C0C7 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
AMBRA1Q9C0C7 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
AMBRA1Q9C0C7 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
AMBRA1Q9C0C7 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
AMBRA1Q9C0C7 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
AMBRA1Q9C0C7 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
AMBRA1Q9C0C7 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
AMBRA1Q9C0C7 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
AMBRA1Q9C0C7 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.79□□□□□ -0.2
AMBRA1Q9C0C7 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
AMBRA1Q9C0C7 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
AMBRA1Q9C0C7 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
AMBRA1Q9C0C7 SALL4P5-201ENST00000419001 1760 ntBASIC13.79□□□□□ -0.2
AMBRA1Q9C0C7 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
AMBRA1Q9C0C7 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.79□□□□□ -0.2
AMBRA1Q9C0C7 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
AMBRA1Q9C0C7 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.79□□□□□ -0.2
AMBRA1Q9C0C7 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.79□□□□□ -0.2
AMBRA1Q9C0C7 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
AMBRA1Q9C0C7 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
AMBRA1Q9C0C7 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC13.79□□□□□ -0.2
AMBRA1Q9C0C7 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
AMBRA1Q9C0C7 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
AMBRA1Q9C0C7 RPL13AP25-201ENST00000484130 612 ntBASIC13.79□□□□□ -0.2
AMBRA1Q9C0C7 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
AMBRA1Q9C0C7 AC022616.1-201ENST00000518688 554 ntBASIC13.79□□□□□ -0.2
AMBRA1Q9C0C7 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.79□□□□□ -0.2
AMBRA1Q9C0C7 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
AMBRA1Q9C0C7 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC13.79□□□□□ -0.2
AMBRA1Q9C0C7 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.79□□□□□ -0.2
AMBRA1Q9C0C7 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.79□□□□□ -0.2
AMBRA1Q9C0C7 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13.79□□□□□ -0.2
AMBRA1Q9C0C7 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.79□□□□□ -0.2
AMBRA1Q9C0C7 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.79□□□□□ -0.2
AMBRA1Q9C0C7 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC13.79□□□□□ -0.2
AMBRA1Q9C0C7 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC13.79□□□□□ -0.2
AMBRA1Q9C0C7 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
AMBRA1Q9C0C7 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
AMBRA1Q9C0C7 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
AMBRA1Q9C0C7 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC13.79□□□□□ -0.2
AMBRA1Q9C0C7 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
AMBRA1Q9C0C7 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
AMBRA1Q9C0C7 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
AMBRA1Q9C0C7 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
AMBRA1Q9C0C7 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.79□□□□□ -0.2
AMBRA1Q9C0C7 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
AMBRA1Q9C0C7 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms