Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
FOXP3Q9BZS1 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
FOXP3Q9BZS1 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
FOXP3Q9BZS1 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
FOXP3Q9BZS1 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
FOXP3Q9BZS1 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.21■□□□□ 0.03
FOXP3Q9BZS1 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.21■□□□□ 0.03
FOXP3Q9BZS1 AC003102.2-201ENST00000589195 1469 ntBASIC15.21■□□□□ 0.03
FOXP3Q9BZS1 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
FOXP3Q9BZS1 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
FOXP3Q9BZS1 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
FOXP3Q9BZS1 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC15.21■□□□□ 0.03
FOXP3Q9BZS1 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC15.21■□□□□ 0.03
FOXP3Q9BZS1 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
FOXP3Q9BZS1 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
FOXP3Q9BZS1 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
FOXP3Q9BZS1 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
FOXP3Q9BZS1 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
FOXP3Q9BZS1 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
FOXP3Q9BZS1 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.21■□□□□ 0.03
FOXP3Q9BZS1 AC004945.1-201ENST00000416738 983 ntBASIC15.21■□□□□ 0.03
FOXP3Q9BZS1 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
FOXP3Q9BZS1 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
FOXP3Q9BZS1 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC15.21■□□□□ 0.03
FOXP3Q9BZS1 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.21■□□□□ 0.03
FOXP3Q9BZS1 CTBP2P5-201ENST00000454986 1264 ntBASIC15.21■□□□□ 0.03
FOXP3Q9BZS1 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
FOXP3Q9BZS1 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
FOXP3Q9BZS1 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC15.21■□□□□ 0.03
FOXP3Q9BZS1 MFF-223ENST00000524634 647 ntTSL 2 BASIC15.21■□□□□ 0.03
FOXP3Q9BZS1 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.21■□□□□ 0.03
FOXP3Q9BZS1 MIR5189-201ENST00000577370 114 ntBASIC15.21■□□□□ 0.03
FOXP3Q9BZS1 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.21■□□□□ 0.03
FOXP3Q9BZS1 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
FOXP3Q9BZS1 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
FOXP3Q9BZS1 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
FOXP3Q9BZS1 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC15.21■□□□□ 0.03
FOXP3Q9BZS1 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
FOXP3Q9BZS1 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC15.21■□□□□ 0.03
FOXP3Q9BZS1 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
FOXP3Q9BZS1 ABR-205ENST00000544583 5595 ntTSL 2 BASIC15.21■□□□□ 0.03
FOXP3Q9BZS1 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
FOXP3Q9BZS1 PDIA3P1-201ENST00000471856 1510 ntBASIC15.21■□□□□ 0.03
FOXP3Q9BZS1 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
FOXP3Q9BZS1 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.21■□□□□ 0.02
FOXP3Q9BZS1 AL136172.1-201ENST00000598590 1394 ntBASIC15.21■□□□□ 0.02
FOXP3Q9BZS1 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
FOXP3Q9BZS1 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
FOXP3Q9BZS1 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
FOXP3Q9BZS1 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
FOXP3Q9BZS1 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
FOXP3Q9BZS1 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC15.21■□□□□ 0.02
FOXP3Q9BZS1 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
FOXP3Q9BZS1 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
FOXP3Q9BZS1 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
FOXP3Q9BZS1 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
FOXP3Q9BZS1 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
FOXP3Q9BZS1 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
FOXP3Q9BZS1 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FOXP3Q9BZS1 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FOXP3Q9BZS1 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC15.2■□□□□ 0.02
FOXP3Q9BZS1 TCAF1P1-201ENST00000414990 2232 ntBASIC15.2■□□□□ 0.02
FOXP3Q9BZS1 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
FOXP3Q9BZS1 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FOXP3Q9BZS1 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
FOXP3Q9BZS1 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FOXP3Q9BZS1 FAM86MP-201ENST00000340703 885 ntBASIC15.2■□□□□ 0.02
FOXP3Q9BZS1 RPF1-202ENST00000370656 724 ntTSL 2 BASIC15.2■□□□□ 0.02
FOXP3Q9BZS1 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
FOXP3Q9BZS1 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.2■□□□□ 0.02
FOXP3Q9BZS1 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.2■□□□□ 0.02
FOXP3Q9BZS1 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.2■□□□□ 0.02
FOXP3Q9BZS1 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.2■□□□□ 0.02
FOXP3Q9BZS1 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC15.2■□□□□ 0.02
FOXP3Q9BZS1 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FOXP3Q9BZS1 AC114812.1-204ENST00000449669 728 ntBASIC15.2■□□□□ 0.02
FOXP3Q9BZS1 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.2■□□□□ 0.02
FOXP3Q9BZS1 AC026434.2-201ENST00000506094 1078 ntBASIC15.2■□□□□ 0.02
FOXP3Q9BZS1 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC15.2■□□□□ 0.02
FOXP3Q9BZS1 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.2■□□□□ 0.02
FOXP3Q9BZS1 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.2■□□□□ 0.02
FOXP3Q9BZS1 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.2■□□□□ 0.02
FOXP3Q9BZS1 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.2■□□□□ 0.02
FOXP3Q9BZS1 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.2■□□□□ 0.02
FOXP3Q9BZS1 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FOXP3Q9BZS1 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FOXP3Q9BZS1 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FOXP3Q9BZS1 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
FOXP3Q9BZS1 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
FOXP3Q9BZS1 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
FOXP3Q9BZS1 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FOXP3Q9BZS1 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
FOXP3Q9BZS1 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
FOXP3Q9BZS1 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC15.2■□□□□ 0.02
FOXP3Q9BZS1 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC15.2■□□□□ 0.02
FOXP3Q9BZS1 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FOXP3Q9BZS1 HPD-204ENST00000543163 1709 ntTSL 5 BASIC15.2■□□□□ 0.02
FOXP3Q9BZS1 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
FOXP3Q9BZS1 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FOXP3Q9BZS1 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms