Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH11XQ9BZA7 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH11XQ9BZA7 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH11XQ9BZA7 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH11XQ9BZA7 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC18.69■□□□□ 0.58
PCDH11XQ9BZA7 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PCDH11XQ9BZA7 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH11XQ9BZA7 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH11XQ9BZA7 AC145285.5-201ENST00000562217 361 ntBASIC18.69■□□□□ 0.58
PCDH11XQ9BZA7 RN7SL596P-201ENST00000582123 288 ntBASIC18.69■□□□□ 0.58
PCDH11XQ9BZA7 HKR1-225ENST00000592168 566 ntTSL 4 BASIC18.69■□□□□ 0.58
PCDH11XQ9BZA7 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC18.69■□□□□ 0.58
PCDH11XQ9BZA7 AC012073.1-201ENST00000606114 1108 ntBASIC18.69■□□□□ 0.58
PCDH11XQ9BZA7 HELLS-212ENST00000630929 400 ntTSL 5 BASIC18.69■□□□□ 0.58
PCDH11XQ9BZA7 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH11XQ9BZA7 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH11XQ9BZA7 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH11XQ9BZA7 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
PCDH11XQ9BZA7 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH11XQ9BZA7 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
PCDH11XQ9BZA7 FAM90A21P-201ENST00000510875 1396 ntBASIC18.68■□□□□ 0.58
PCDH11XQ9BZA7 FAM90A15P-201ENST00000514465 1395 ntBASIC18.68■□□□□ 0.58
PCDH11XQ9BZA7 FAM90A6P-201ENST00000515148 1394 ntBASIC18.68■□□□□ 0.58
PCDH11XQ9BZA7 FAM90A16P-201ENST00000526662 1395 ntBASIC18.68■□□□□ 0.58
PCDH11XQ9BZA7 FAM90A9P-201ENST00000527940 1395 ntBASIC18.68■□□□□ 0.58
PCDH11XQ9BZA7 FAM90A5P-201ENST00000528738 1395 ntBASIC18.68■□□□□ 0.58
PCDH11XQ9BZA7 FAM90A14P-201ENST00000530386 1395 ntBASIC18.68■□□□□ 0.58
PCDH11XQ9BZA7 FAM90A13P-201ENST00000534703 1395 ntBASIC18.68■□□□□ 0.58
PCDH11XQ9BZA7 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH11XQ9BZA7 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH11XQ9BZA7 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDH11XQ9BZA7 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH11XQ9BZA7 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH11XQ9BZA7 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC18.68■□□□□ 0.58
PCDH11XQ9BZA7 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH11XQ9BZA7 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
PCDH11XQ9BZA7 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH11XQ9BZA7 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH11XQ9BZA7 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH11XQ9BZA7 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH11XQ9BZA7 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH11XQ9BZA7 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH11XQ9BZA7 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PCDH11XQ9BZA7 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC18.68■□□□□ 0.58
PCDH11XQ9BZA7 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
PCDH11XQ9BZA7 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PCDH11XQ9BZA7 AC108734.2-201ENST00000420887 1069 ntBASIC18.68■□□□□ 0.58
PCDH11XQ9BZA7 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDH11XQ9BZA7 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDH11XQ9BZA7 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH11XQ9BZA7 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH11XQ9BZA7 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDH11XQ9BZA7 MAX-218ENST00000557746 571 ntTSL 4 BASIC18.68■□□□□ 0.58
PCDH11XQ9BZA7 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDH11XQ9BZA7 GAS7-216ENST00000583882 553 ntTSL 5 BASIC18.68■□□□□ 0.58
PCDH11XQ9BZA7 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC18.68■□□□□ 0.58
PCDH11XQ9BZA7 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH11XQ9BZA7 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
PCDH11XQ9BZA7 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH11XQ9BZA7 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH11XQ9BZA7 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH11XQ9BZA7 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PCDH11XQ9BZA7 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH11XQ9BZA7 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PCDH11XQ9BZA7 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
PCDH11XQ9BZA7 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDH11XQ9BZA7 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC18.67■□□□□ 0.58
PCDH11XQ9BZA7 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PCDH11XQ9BZA7 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDH11XQ9BZA7 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
PCDH11XQ9BZA7 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PCDH11XQ9BZA7 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDH11XQ9BZA7 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PCDH11XQ9BZA7 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDH11XQ9BZA7 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PCDH11XQ9BZA7 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDH11XQ9BZA7 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDH11XQ9BZA7 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PCDH11XQ9BZA7 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDH11XQ9BZA7 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDH11XQ9BZA7 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDH11XQ9BZA7 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PCDH11XQ9BZA7 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
PCDH11XQ9BZA7 AL135901.1-201ENST00000451812 333 ntBASIC18.67■□□□□ 0.58
PCDH11XQ9BZA7 RN7SL788P-201ENST00000460504 316 ntBASIC18.67■□□□□ 0.58
PCDH11XQ9BZA7 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC18.67■□□□□ 0.58
PCDH11XQ9BZA7 AC005740.1-201ENST00000515639 522 ntBASIC18.67■□□□□ 0.58
PCDH11XQ9BZA7 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC18.67■□□□□ 0.58
PCDH11XQ9BZA7 DNM1P51-201ENST00000558149 522 ntBASIC18.67■□□□□ 0.58
PCDH11XQ9BZA7 AP005264.5-201ENST00000590066 467 ntBASIC18.67■□□□□ 0.58
PCDH11XQ9BZA7 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDH11XQ9BZA7 AC010976.2-201ENST00000609697 852 ntBASIC18.67■□□□□ 0.58
PCDH11XQ9BZA7 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
PCDH11XQ9BZA7 AL354702.1-201ENST00000442006 1960 ntBASIC18.67■□□□□ 0.58
PCDH11XQ9BZA7 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDH11XQ9BZA7 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
PCDH11XQ9BZA7 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PCDH11XQ9BZA7 AC006486.2-201ENST00000624246 2199 ntBASIC18.67■□□□□ 0.58
PCDH11XQ9BZA7 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH11XQ9BZA7 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms