Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SSBP4Q9BWG4 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SSBP4Q9BWG4 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
SSBP4Q9BWG4 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
SSBP4Q9BWG4 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SSBP4Q9BWG4 BEND3P3-201ENST00000611030 2440 ntBASIC11.23□□□□□ -0.61
SSBP4Q9BWG4 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SSBP4Q9BWG4 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
SSBP4Q9BWG4 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
SSBP4Q9BWG4 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC11.23□□□□□ -0.61
SSBP4Q9BWG4 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
SSBP4Q9BWG4 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SSBP4Q9BWG4 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC11.23□□□□□ -0.61
SSBP4Q9BWG4 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC11.23□□□□□ -0.61
SSBP4Q9BWG4 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC11.23□□□□□ -0.61
SSBP4Q9BWG4 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC11.23□□□□□ -0.61
SSBP4Q9BWG4 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC11.23□□□□□ -0.61
SSBP4Q9BWG4 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC11.23□□□□□ -0.61
SSBP4Q9BWG4 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC11.23□□□□□ -0.61
SSBP4Q9BWG4 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SSBP4Q9BWG4 AC090079.2-201ENST00000575289 768 ntBASIC11.23□□□□□ -0.61
SSBP4Q9BWG4 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC11.23□□□□□ -0.61
SSBP4Q9BWG4 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC11.23□□□□□ -0.61
SSBP4Q9BWG4 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC11.23□□□□□ -0.61
SSBP4Q9BWG4 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC11.23□□□□□ -0.61
SSBP4Q9BWG4 AC025181.2-201ENST00000606994 802 ntBASIC11.23□□□□□ -0.61
SSBP4Q9BWG4 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
SSBP4Q9BWG4 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
SSBP4Q9BWG4 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SSBP4Q9BWG4 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SSBP4Q9BWG4 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SSBP4Q9BWG4 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC11.23□□□□□ -0.61
SSBP4Q9BWG4 CROT-203ENST00000419147 2959 ntTSL 2 BASIC11.23□□□□□ -0.61
SSBP4Q9BWG4 UXT-AS1-201ENST00000590504 1525 ntBASIC11.23□□□□□ -0.61
SSBP4Q9BWG4 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SSBP4Q9BWG4 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
SSBP4Q9BWG4 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC11.23□□□□□ -0.61
SSBP4Q9BWG4 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC11.23□□□□□ -0.61
SSBP4Q9BWG4 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
SSBP4Q9BWG4 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
SSBP4Q9BWG4 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
SSBP4Q9BWG4 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SSBP4Q9BWG4 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SSBP4Q9BWG4 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SSBP4Q9BWG4 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SSBP4Q9BWG4 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SSBP4Q9BWG4 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC11.23□□□□□ -0.61
SSBP4Q9BWG4 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SSBP4Q9BWG4 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SSBP4Q9BWG4 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SSBP4Q9BWG4 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC11.23□□□□□ -0.61
SSBP4Q9BWG4 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SSBP4Q9BWG4 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SSBP4Q9BWG4 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SSBP4Q9BWG4 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
SSBP4Q9BWG4 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC11.23□□□□□ -0.61
SSBP4Q9BWG4 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
SSBP4Q9BWG4 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC11.22□□□□□ -0.61
SSBP4Q9BWG4 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SSBP4Q9BWG4 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
SSBP4Q9BWG4 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
SSBP4Q9BWG4 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SSBP4Q9BWG4 DEK-201ENST00000244776 1441 ntTSL 2 BASIC11.22□□□□□ -0.61
SSBP4Q9BWG4 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SSBP4Q9BWG4 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
SSBP4Q9BWG4 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SSBP4Q9BWG4 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SSBP4Q9BWG4 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
SSBP4Q9BWG4 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
SSBP4Q9BWG4 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
SSBP4Q9BWG4 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SSBP4Q9BWG4 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
SSBP4Q9BWG4 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
SSBP4Q9BWG4 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SSBP4Q9BWG4 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SSBP4Q9BWG4 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SSBP4Q9BWG4 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC11.22□□□□□ -0.61
SSBP4Q9BWG4 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SSBP4Q9BWG4 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SSBP4Q9BWG4 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
SSBP4Q9BWG4 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC11.22□□□□□ -0.61
SSBP4Q9BWG4 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC11.22□□□□□ -0.61
SSBP4Q9BWG4 ZNF259P1-201ENST00000407656 1365 ntBASIC11.22□□□□□ -0.61
SSBP4Q9BWG4 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC11.22□□□□□ -0.61
SSBP4Q9BWG4 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC11.22□□□□□ -0.61
SSBP4Q9BWG4 AC074338.1-201ENST00000416825 156 ntBASIC11.22□□□□□ -0.61
SSBP4Q9BWG4 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC11.22□□□□□ -0.61
SSBP4Q9BWG4 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC11.22□□□□□ -0.61
SSBP4Q9BWG4 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC11.22□□□□□ -0.61
SSBP4Q9BWG4 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SSBP4Q9BWG4 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC11.22□□□□□ -0.61
SSBP4Q9BWG4 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SSBP4Q9BWG4 PFN2-205ENST00000461868 613 ntTSL 2 BASIC11.22□□□□□ -0.61
SSBP4Q9BWG4 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC11.22□□□□□ -0.61
SSBP4Q9BWG4 AC069335.1-201ENST00000489972 472 ntBASIC11.22□□□□□ -0.61
SSBP4Q9BWG4 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SSBP4Q9BWG4 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
SSBP4Q9BWG4 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC11.22□□□□□ -0.61
SSBP4Q9BWG4 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC11.22□□□□□ -0.61
SSBP4Q9BWG4 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC11.22□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 171.1 ms