Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC11.78□□□□□ -0.52
CHRDL1Q9BU40 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
CHRDL1Q9BU40 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
CHRDL1Q9BU40 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CHRDL1Q9BU40 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CHRDL1Q9BU40 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CHRDL1Q9BU40 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC11.78□□□□□ -0.52
CHRDL1Q9BU40 AL442647.2-201ENST00000429864 857 ntBASIC11.78□□□□□ -0.52
CHRDL1Q9BU40 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC11.78□□□□□ -0.52
CHRDL1Q9BU40 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC11.78□□□□□ -0.52
CHRDL1Q9BU40 FAM207CP-201ENST00000443486 507 ntBASIC11.78□□□□□ -0.52
CHRDL1Q9BU40 MYCLP2-201ENST00000449268 967 ntBASIC11.78□□□□□ -0.52
CHRDL1Q9BU40 GALT-202ENST00000450095 1280 ntTSL 2 BASIC11.78□□□□□ -0.52
CHRDL1Q9BU40 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
CHRDL1Q9BU40 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC11.78□□□□□ -0.52
CHRDL1Q9BU40 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC11.78□□□□□ -0.52
CHRDL1Q9BU40 AC092552.1-201ENST00000547243 906 ntBASIC11.78□□□□□ -0.52
CHRDL1Q9BU40 AL359711.2-201ENST00000563105 872 ntBASIC11.78□□□□□ -0.52
CHRDL1Q9BU40 SPDYE22P-201ENST00000582158 798 ntBASIC11.78□□□□□ -0.52
CHRDL1Q9BU40 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC11.78□□□□□ -0.52
CHRDL1Q9BU40 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CHRDL1Q9BU40 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC11.78□□□□□ -0.52
CHRDL1Q9BU40 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
CHRDL1Q9BU40 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC11.78□□□□□ -0.52
CHRDL1Q9BU40 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CHRDL1Q9BU40 AC007431.3-201ENST00000623221 587 ntBASIC11.78□□□□□ -0.52
CHRDL1Q9BU40 BX539320.1-201ENST00000623759 877 ntBASIC11.78□□□□□ -0.52
CHRDL1Q9BU40 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CHRDL1Q9BU40 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
CHRDL1Q9BU40 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
CHRDL1Q9BU40 AC018442.1-201ENST00000421439 2061 ntBASIC11.78□□□□□ -0.52
CHRDL1Q9BU40 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CHRDL1Q9BU40 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CHRDL1Q9BU40 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
CHRDL1Q9BU40 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
CHRDL1Q9BU40 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CHRDL1Q9BU40 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CHRDL1Q9BU40 APP-205ENST00000358918 2366 ntTSL 5 BASIC11.78□□□□□ -0.52
CHRDL1Q9BU40 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CHRDL1Q9BU40 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
CHRDL1Q9BU40 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC11.78□□□□□ -0.52
CHRDL1Q9BU40 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC11.78□□□□□ -0.52
CHRDL1Q9BU40 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CHRDL1Q9BU40 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CHRDL1Q9BU40 AL391825.1-201ENST00000457671 1364 ntBASIC11.78□□□□□ -0.52
CHRDL1Q9BU40 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC11.78□□□□□ -0.52
CHRDL1Q9BU40 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CHRDL1Q9BU40 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC11.78□□□□□ -0.52
CHRDL1Q9BU40 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CHRDL1Q9BU40 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CHRDL1Q9BU40 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
CHRDL1Q9BU40 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
CHRDL1Q9BU40 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
CHRDL1Q9BU40 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
CHRDL1Q9BU40 AC015802.1-201ENST00000588104 1449 ntBASIC11.77□□□□□ -0.52
CHRDL1Q9BU40 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
CHRDL1Q9BU40 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
CHRDL1Q9BU40 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
CHRDL1Q9BU40 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC11.77□□□□□ -0.52
CHRDL1Q9BU40 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC11.77□□□□□ -0.52
CHRDL1Q9BU40 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
CHRDL1Q9BU40 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
CHRDL1Q9BU40 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.52
CHRDL1Q9BU40 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
CHRDL1Q9BU40 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
CHRDL1Q9BU40 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
CHRDL1Q9BU40 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
CHRDL1Q9BU40 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
CHRDL1Q9BU40 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CHRDL1Q9BU40 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
CHRDL1Q9BU40 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CHRDL1Q9BU40 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC11.77□□□□□ -0.53
CHRDL1Q9BU40 TEX30-203ENST00000376022 828 ntTSL 2 BASIC11.77□□□□□ -0.53
CHRDL1Q9BU40 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
CHRDL1Q9BU40 AL645937.2-201ENST00000396808 931 ntBASIC11.77□□□□□ -0.53
CHRDL1Q9BU40 AC236430.1-201ENST00000402231 743 ntBASIC11.77□□□□□ -0.53
CHRDL1Q9BU40 AC087499.6-201ENST00000411576 835 ntBASIC11.77□□□□□ -0.53
CHRDL1Q9BU40 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC11.77□□□□□ -0.53
CHRDL1Q9BU40 AC002472.2-201ENST00000442739 958 ntBASIC11.77□□□□□ -0.53
CHRDL1Q9BU40 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC11.77□□□□□ -0.53
CHRDL1Q9BU40 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC11.77□□□□□ -0.53
CHRDL1Q9BU40 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CHRDL1Q9BU40 AP001582.1-201ENST00000525856 295 ntBASIC11.77□□□□□ -0.53
CHRDL1Q9BU40 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC11.77□□□□□ -0.53
CHRDL1Q9BU40 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
CHRDL1Q9BU40 AC124283.3-201ENST00000570869 594 ntBASIC11.77□□□□□ -0.53
CHRDL1Q9BU40 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
CHRDL1Q9BU40 AC008761.3-201ENST00000624803 892 ntBASIC11.77□□□□□ -0.53
CHRDL1Q9BU40 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CHRDL1Q9BU40 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CHRDL1Q9BU40 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
CHRDL1Q9BU40 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CHRDL1Q9BU40 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC11.77□□□□□ -0.53
CHRDL1Q9BU40 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC11.77□□□□□ -0.53
CHRDL1Q9BU40 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC11.77□□□□□ -0.53
CHRDL1Q9BU40 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC11.77□□□□□ -0.53
CHRDL1Q9BU40 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
CHRDL1Q9BU40 KRT8P22-201ENST00000562317 1415 ntBASIC11.77□□□□□ -0.53
CHRDL1Q9BU40 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC11.77□□□□□ -0.53
CHRDL1Q9BU40 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms