Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
PDLIM5Q96HC4 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
PDLIM5Q96HC4 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDLIM5Q96HC4 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC14.3□□□□□ -0.12
PDLIM5Q96HC4 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDLIM5Q96HC4 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
PDLIM5Q96HC4 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC14.3□□□□□ -0.12
PDLIM5Q96HC4 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
PDLIM5Q96HC4 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
PDLIM5Q96HC4 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDLIM5Q96HC4 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PDLIM5Q96HC4 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PDLIM5Q96HC4 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDLIM5Q96HC4 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDLIM5Q96HC4 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDLIM5Q96HC4 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
PDLIM5Q96HC4 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC14.3□□□□□ -0.12
PDLIM5Q96HC4 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDLIM5Q96HC4 AC010327.5-201ENST00000586923 3061 ntBASIC14.3□□□□□ -0.12
PDLIM5Q96HC4 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.3□□□□□ -0.12
PDLIM5Q96HC4 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PDLIM5Q96HC4 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC14.3□□□□□ -0.12
PDLIM5Q96HC4 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDLIM5Q96HC4 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
PDLIM5Q96HC4 AC026954.1-201ENST00000429771 1293 ntBASIC14.3□□□□□ -0.12
PDLIM5Q96HC4 AL157407.1-201ENST00000435784 904 ntBASIC14.3□□□□□ -0.12
PDLIM5Q96HC4 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC14.3□□□□□ -0.12
PDLIM5Q96HC4 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC14.3□□□□□ -0.12
PDLIM5Q96HC4 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PDLIM5Q96HC4 KRT17P8-201ENST00000540749 863 ntBASIC14.3□□□□□ -0.12
PDLIM5Q96HC4 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.3□□□□□ -0.12
PDLIM5Q96HC4 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC14.3□□□□□ -0.12
PDLIM5Q96HC4 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDLIM5Q96HC4 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDLIM5Q96HC4 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.3□□□□□ -0.12
PDLIM5Q96HC4 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
PDLIM5Q96HC4 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDLIM5Q96HC4 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
PDLIM5Q96HC4 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDLIM5Q96HC4 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDLIM5Q96HC4 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PDLIM5Q96HC4 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC14.3□□□□□ -0.12
PDLIM5Q96HC4 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDLIM5Q96HC4 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDLIM5Q96HC4 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDLIM5Q96HC4 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDLIM5Q96HC4 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
PDLIM5Q96HC4 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDLIM5Q96HC4 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.3□□□□□ -0.12
PDLIM5Q96HC4 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PDLIM5Q96HC4 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
PDLIM5Q96HC4 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC14.29□□□□□ -0.12
PDLIM5Q96HC4 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDLIM5Q96HC4 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
PDLIM5Q96HC4 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.29□□□□□ -0.12
PDLIM5Q96HC4 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDLIM5Q96HC4 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDLIM5Q96HC4 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
PDLIM5Q96HC4 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
PDLIM5Q96HC4 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDLIM5Q96HC4 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PDLIM5Q96HC4 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PDLIM5Q96HC4 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDLIM5Q96HC4 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PDLIM5Q96HC4 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDLIM5Q96HC4 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
PDLIM5Q96HC4 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC14.29□□□□□ -0.12
PDLIM5Q96HC4 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC14.29□□□□□ -0.12
PDLIM5Q96HC4 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PDLIM5Q96HC4 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC14.29□□□□□ -0.12
PDLIM5Q96HC4 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC14.29□□□□□ -0.12
PDLIM5Q96HC4 AL645933.1-201ENST00000440087 609 ntBASIC14.29□□□□□ -0.12
PDLIM5Q96HC4 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC14.29□□□□□ -0.12
PDLIM5Q96HC4 AC100850.1-201ENST00000506768 649 ntBASIC14.29□□□□□ -0.12
PDLIM5Q96HC4 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC14.29□□□□□ -0.12
PDLIM5Q96HC4 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDLIM5Q96HC4 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.29□□□□□ -0.12
PDLIM5Q96HC4 AC009955.4-201ENST00000597192 544 ntBASIC14.29□□□□□ -0.12
PDLIM5Q96HC4 AL512343.1-201ENST00000605837 169 ntBASIC14.29□□□□□ -0.12
PDLIM5Q96HC4 WNT11-204ENST00000621122 789 ntTSL 5 BASIC14.29□□□□□ -0.12
PDLIM5Q96HC4 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.29□□□□□ -0.12
PDLIM5Q96HC4 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDLIM5Q96HC4 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.29□□□□□ -0.12
PDLIM5Q96HC4 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
PDLIM5Q96HC4 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC14.29□□□□□ -0.12
PDLIM5Q96HC4 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDLIM5Q96HC4 REXO1L6P-201ENST00000603433 1515 ntBASIC14.29□□□□□ -0.12
PDLIM5Q96HC4 TMBIM7P-202ENST00000641474 1516 ntBASIC14.29□□□□□ -0.12
PDLIM5Q96HC4 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC14.29□□□□□ -0.12
PDLIM5Q96HC4 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
PDLIM5Q96HC4 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.29□□□□□ -0.12
PDLIM5Q96HC4 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PDLIM5Q96HC4 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
PDLIM5Q96HC4 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.29□□□□□ -0.12
PDLIM5Q96HC4 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PDLIM5Q96HC4 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDLIM5Q96HC4 AL022313.4-201ENST00000562756 2046 ntBASIC14.29□□□□□ -0.12
PDLIM5Q96HC4 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.29□□□□□ -0.12
PDLIM5Q96HC4 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PDLIM5Q96HC4 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms