Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHMP6Q96FZ7 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CHMP6Q96FZ7 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHMP6Q96FZ7 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHMP6Q96FZ7 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC14.87□□□□□ -0.03
CHMP6Q96FZ7 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC14.87□□□□□ -0.03
CHMP6Q96FZ7 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHMP6Q96FZ7 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHMP6Q96FZ7 AC011498.7-201ENST00000624986 2027 ntBASIC14.87□□□□□ -0.03
CHMP6Q96FZ7 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHMP6Q96FZ7 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.87□□□□□ -0.03
CHMP6Q96FZ7 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CHMP6Q96FZ7 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHMP6Q96FZ7 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC14.86□□□□□ -0.03
CHMP6Q96FZ7 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC14.86□□□□□ -0.03
CHMP6Q96FZ7 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CHMP6Q96FZ7 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHMP6Q96FZ7 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CHMP6Q96FZ7 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHMP6Q96FZ7 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC14.86□□□□□ -0.03
CHMP6Q96FZ7 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHMP6Q96FZ7 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC14.86□□□□□ -0.03
CHMP6Q96FZ7 AC135782.3-201ENST00000562782 2105 ntBASIC14.86□□□□□ -0.03
CHMP6Q96FZ7 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.86□□□□□ -0.03
CHMP6Q96FZ7 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.86□□□□□ -0.03
CHMP6Q96FZ7 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14.86□□□□□ -0.03
CHMP6Q96FZ7 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CHMP6Q96FZ7 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.86□□□□□ -0.03
CHMP6Q96FZ7 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CHMP6Q96FZ7 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC14.86□□□□□ -0.03
CHMP6Q96FZ7 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHMP6Q96FZ7 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CHMP6Q96FZ7 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
CHMP6Q96FZ7 CNN2P11-201ENST00000429351 262 ntBASIC14.86□□□□□ -0.03
CHMP6Q96FZ7 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.86□□□□□ -0.03
CHMP6Q96FZ7 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.86□□□□□ -0.03
CHMP6Q96FZ7 KRT18P43-201ENST00000469825 1281 ntBASIC14.86□□□□□ -0.03
CHMP6Q96FZ7 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.86□□□□□ -0.03
CHMP6Q96FZ7 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC14.86□□□□□ -0.03
CHMP6Q96FZ7 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
CHMP6Q96FZ7 AC093520.2-201ENST00000561830 333 ntBASIC14.86□□□□□ -0.03
CHMP6Q96FZ7 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHMP6Q96FZ7 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.86□□□□□ -0.03
CHMP6Q96FZ7 AC105021.1-202ENST00000570572 669 ntBASIC14.86□□□□□ -0.03
CHMP6Q96FZ7 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.86□□□□□ -0.03
CHMP6Q96FZ7 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHMP6Q96FZ7 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHMP6Q96FZ7 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHMP6Q96FZ7 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHMP6Q96FZ7 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CHMP6Q96FZ7 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHMP6Q96FZ7 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC14.86□□□□□ -0.03
CHMP6Q96FZ7 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CHMP6Q96FZ7 AL121723.1-201ENST00000445194 1519 ntBASIC14.86□□□□□ -0.03
CHMP6Q96FZ7 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.86□□□□□ -0.03
CHMP6Q96FZ7 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHMP6Q96FZ7 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CHMP6Q96FZ7 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHMP6Q96FZ7 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.85□□□□□ -0.03
CHMP6Q96FZ7 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHMP6Q96FZ7 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHMP6Q96FZ7 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CHMP6Q96FZ7 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CHMP6Q96FZ7 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHMP6Q96FZ7 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC14.85□□□□□ -0.03
CHMP6Q96FZ7 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CHMP6Q96FZ7 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CHMP6Q96FZ7 KRT8P14-201ENST00000414254 1442 ntBASIC14.85□□□□□ -0.03
CHMP6Q96FZ7 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
CHMP6Q96FZ7 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHMP6Q96FZ7 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHMP6Q96FZ7 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHMP6Q96FZ7 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHMP6Q96FZ7 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHMP6Q96FZ7 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
CHMP6Q96FZ7 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHMP6Q96FZ7 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
CHMP6Q96FZ7 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.85□□□□□ -0.03
CHMP6Q96FZ7 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.85□□□□□ -0.03
CHMP6Q96FZ7 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.85□□□□□ -0.03
CHMP6Q96FZ7 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CHMP6Q96FZ7 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.85□□□□□ -0.03
CHMP6Q96FZ7 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.85□□□□□ -0.03
CHMP6Q96FZ7 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHMP6Q96FZ7 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.85□□□□□ -0.03
CHMP6Q96FZ7 AC084121.4-201ENST00000641598 221 ntBASIC14.85□□□□□ -0.03
CHMP6Q96FZ7 AF228730.8-201ENST00000642140 221 ntBASIC14.85□□□□□ -0.03
CHMP6Q96FZ7 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC14.85□□□□□ -0.03
CHMP6Q96FZ7 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CHMP6Q96FZ7 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.85□□□□□ -0.03
CHMP6Q96FZ7 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
CHMP6Q96FZ7 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC14.85□□□□□ -0.03
CHMP6Q96FZ7 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.85□□□□□ -0.03
CHMP6Q96FZ7 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC14.85□□□□□ -0.03
CHMP6Q96FZ7 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC14.85□□□□□ -0.03
CHMP6Q96FZ7 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHMP6Q96FZ7 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CHMP6Q96FZ7 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHMP6Q96FZ7 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHMP6Q96FZ7 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms