Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
APH1AQ96BI3 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
APH1AQ96BI3 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
APH1AQ96BI3 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.04□□□□□ -0.32
APH1AQ96BI3 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
APH1AQ96BI3 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
APH1AQ96BI3 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.04□□□□□ -0.32
APH1AQ96BI3 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.04□□□□□ -0.32
APH1AQ96BI3 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
APH1AQ96BI3 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
APH1AQ96BI3 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
APH1AQ96BI3 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
APH1AQ96BI3 AC139712.1-201ENST00000378256 1875 ntBASIC13.04□□□□□ -0.32
APH1AQ96BI3 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
APH1AQ96BI3 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.04□□□□□ -0.32
APH1AQ96BI3 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC13.04□□□□□ -0.32
APH1AQ96BI3 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
APH1AQ96BI3 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC13.03□□□□□ -0.32
APH1AQ96BI3 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
APH1AQ96BI3 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.03□□□□□ -0.32
APH1AQ96BI3 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC13.03□□□□□ -0.32
APH1AQ96BI3 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
APH1AQ96BI3 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
APH1AQ96BI3 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
APH1AQ96BI3 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.03□□□□□ -0.32
APH1AQ96BI3 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
APH1AQ96BI3 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
APH1AQ96BI3 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
APH1AQ96BI3 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.03□□□□□ -0.32
APH1AQ96BI3 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
APH1AQ96BI3 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
APH1AQ96BI3 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.03□□□□□ -0.32
APH1AQ96BI3 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
APH1AQ96BI3 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
APH1AQ96BI3 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
APH1AQ96BI3 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
APH1AQ96BI3 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
APH1AQ96BI3 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
APH1AQ96BI3 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC13.03□□□□□ -0.32
APH1AQ96BI3 KRTAP10-13P-201ENST00000412914 571 ntBASIC13.03□□□□□ -0.32
APH1AQ96BI3 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC13.03□□□□□ -0.32
APH1AQ96BI3 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
APH1AQ96BI3 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC13.03□□□□□ -0.32
APH1AQ96BI3 TUBB8P8-201ENST00000458717 1058 ntBASIC13.03□□□□□ -0.32
APH1AQ96BI3 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC13.03□□□□□ -0.32
APH1AQ96BI3 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
APH1AQ96BI3 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
APH1AQ96BI3 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
APH1AQ96BI3 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
APH1AQ96BI3 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC13.03□□□□□ -0.32
APH1AQ96BI3 NAT9-222ENST00000583476 583 ntTSL 3 BASIC13.03□□□□□ -0.32
APH1AQ96BI3 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC13.03□□□□□ -0.32
APH1AQ96BI3 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC13.03□□□□□ -0.32
APH1AQ96BI3 AC009884.2-201ENST00000603110 324 ntBASIC13.03□□□□□ -0.32
APH1AQ96BI3 AL022328.3-201ENST00000607943 679 ntBASIC13.03□□□□□ -0.32
APH1AQ96BI3 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC13.03□□□□□ -0.32
APH1AQ96BI3 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC13.03□□□□□ -0.32
APH1AQ96BI3 AL162426.1-201ENST00000624141 743 ntBASIC13.03□□□□□ -0.32
APH1AQ96BI3 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC13.03□□□□□ -0.32
APH1AQ96BI3 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
APH1AQ96BI3 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
APH1AQ96BI3 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
APH1AQ96BI3 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
APH1AQ96BI3 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
APH1AQ96BI3 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.03□□□□□ -0.32
APH1AQ96BI3 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
APH1AQ96BI3 GRN-222ENST00000639447 1314 ntTSL 2 BASIC13.03□□□□□ -0.32
APH1AQ96BI3 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
APH1AQ96BI3 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.03□□□□□ -0.32
APH1AQ96BI3 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
APH1AQ96BI3 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC13.03□□□□□ -0.32
APH1AQ96BI3 KRT8P29-201ENST00000420409 1371 ntBASIC13.03□□□□□ -0.32
APH1AQ96BI3 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
APH1AQ96BI3 AC104581.4-201ENST00000623126 3052 ntBASIC13.03□□□□□ -0.32
APH1AQ96BI3 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
APH1AQ96BI3 AL354702.1-201ENST00000442006 1960 ntBASIC13.03□□□□□ -0.32
APH1AQ96BI3 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
APH1AQ96BI3 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC13.03□□□□□ -0.32
APH1AQ96BI3 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
APH1AQ96BI3 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
APH1AQ96BI3 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
APH1AQ96BI3 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.03□□□□□ -0.32
APH1AQ96BI3 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
APH1AQ96BI3 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.03□□□□□ -0.32
APH1AQ96BI3 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
APH1AQ96BI3 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
APH1AQ96BI3 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC13.03□□□□□ -0.32
APH1AQ96BI3 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
APH1AQ96BI3 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
APH1AQ96BI3 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
APH1AQ96BI3 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
APH1AQ96BI3 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
APH1AQ96BI3 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
APH1AQ96BI3 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
APH1AQ96BI3 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.03□□□□□ -0.32
APH1AQ96BI3 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
APH1AQ96BI3 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
APH1AQ96BI3 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
APH1AQ96BI3 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
APH1AQ96BI3 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms