Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
RPGRQ92834 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RPGRQ92834 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RPGRQ92834 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RPGRQ92834 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
RPGRQ92834 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC17.88■□□□□ 0.45
RPGRQ92834 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC17.88■□□□□ 0.45
RPGRQ92834 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC17.88■□□□□ 0.45
RPGRQ92834 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC17.88■□□□□ 0.45
RPGRQ92834 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC17.88■□□□□ 0.45
RPGRQ92834 LINC00634-202ENST00000505157 222 ntBASIC17.88■□□□□ 0.45
RPGRQ92834 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC17.88■□□□□ 0.45
RPGRQ92834 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC17.88■□□□□ 0.45
RPGRQ92834 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC17.88■□□□□ 0.45
RPGRQ92834 ELP5-212ENST00000574255 671 ntTSL 2 BASIC17.88■□□□□ 0.45
RPGRQ92834 MIR4472-1-201ENST00000584349 80 ntBASIC17.88■□□□□ 0.45
RPGRQ92834 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RPGRQ92834 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RPGRQ92834 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RPGRQ92834 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.88■□□□□ 0.45
RPGRQ92834 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RPGRQ92834 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
RPGRQ92834 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC17.88■□□□□ 0.45
RPGRQ92834 USP4-203ENST00000415188 1454 ntTSL 3 BASIC17.88■□□□□ 0.45
RPGRQ92834 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC17.88■□□□□ 0.45
RPGRQ92834 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RPGRQ92834 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC17.88■□□□□ 0.45
RPGRQ92834 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RPGRQ92834 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RPGRQ92834 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RPGRQ92834 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RPGRQ92834 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RPGRQ92834 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RPGRQ92834 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
RPGRQ92834 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RPGRQ92834 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RPGRQ92834 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.87■□□□□ 0.45
RPGRQ92834 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
RPGRQ92834 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
RPGRQ92834 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RPGRQ92834 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
RPGRQ92834 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
RPGRQ92834 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RPGRQ92834 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
RPGRQ92834 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC17.87■□□□□ 0.45
RPGRQ92834 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC17.87■□□□□ 0.45
RPGRQ92834 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC17.87■□□□□ 0.45
RPGRQ92834 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC17.87■□□□□ 0.45
RPGRQ92834 RN7SL665P-201ENST00000578793 300 ntBASIC17.87■□□□□ 0.45
RPGRQ92834 AC140113.1-201ENST00000603467 169 ntBASIC17.87■□□□□ 0.45
RPGRQ92834 FO393412.1-201ENST00000619841 382 ntBASIC17.87■□□□□ 0.45
RPGRQ92834 AC009145.4-201ENST00000625119 1294 ntBASIC17.87■□□□□ 0.45
RPGRQ92834 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
RPGRQ92834 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RPGRQ92834 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC17.87■□□□□ 0.45
RPGRQ92834 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RPGRQ92834 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC17.87■□□□□ 0.45
RPGRQ92834 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RPGRQ92834 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RPGRQ92834 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC17.87■□□□□ 0.45
RPGRQ92834 FTX-216ENST00000638985 1367 ntTSL 5 BASIC17.87■□□□□ 0.45
RPGRQ92834 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RPGRQ92834 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
RPGRQ92834 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC17.87■□□□□ 0.45
RPGRQ92834 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC17.87■□□□□ 0.45
RPGRQ92834 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC17.87■□□□□ 0.45
RPGRQ92834 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
RPGRQ92834 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RPGRQ92834 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RPGRQ92834 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.87■□□□□ 0.45
RPGRQ92834 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
RPGRQ92834 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC17.87■□□□□ 0.45
RPGRQ92834 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC17.87■□□□□ 0.45
RPGRQ92834 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RPGRQ92834 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RPGRQ92834 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC17.86■□□□□ 0.45
RPGRQ92834 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RPGRQ92834 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.86■□□□□ 0.45
RPGRQ92834 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPGRQ92834 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPGRQ92834 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPGRQ92834 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPGRQ92834 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
RPGRQ92834 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC17.86■□□□□ 0.45
RPGRQ92834 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPGRQ92834 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPGRQ92834 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPGRQ92834 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC17.86■□□□□ 0.45
RPGRQ92834 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RPGRQ92834 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC17.86■□□□□ 0.45
RPGRQ92834 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC17.86■□□□□ 0.45
RPGRQ92834 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RPGRQ92834 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC17.86■□□□□ 0.45
RPGRQ92834 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC17.86■□□□□ 0.45
RPGRQ92834 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC17.86■□□□□ 0.45
RPGRQ92834 AC007952.4-201ENST00000573866 637 ntBASIC17.86■□□□□ 0.45
RPGRQ92834 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC17.86■□□□□ 0.45
RPGRQ92834 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC17.86■□□□□ 0.45
RPGRQ92834 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPGRQ92834 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms