Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 LINC00115-201ENST00000473798 1317 ntBASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 TTN-AS1-264ENST00000627564 1319 ntTSL 5 BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 AC026461.4-201ENST00000379816 242 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 U2AF1L4-203ENST00000412391 904 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 AC105443.1-201ENST00000433754 712 ntBASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 AC010997.1-201ENST00000447646 350 ntBASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 CICP12-201ENST00000455801 843 ntBASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 AL136982.5-201ENST00000605222 294 ntBASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 AC007389.1-208ENST00000607539 512 ntTSL 4 BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 AL031587.4-201ENST00000609265 691 ntBASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 BX088702.1-201ENST00000610784 235 ntBASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 ANKDD1A-207ENST00000496660 1477 ntTSL 2 BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 RPLP1-202ENST00000357790 445 ntTSL 2 BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 RPL21P135-201ENST00000442539 791 ntBASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 GAPDHP1-201ENST00000452570 1005 ntBASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 LINC01287-203ENST00000454441 1007 ntTSL 5 BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 AC093700.1-201ENST00000503348 717 ntBASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 AC021242.2-202ENST00000522129 545 ntTSL 4 BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 RBMX-209ENST00000565438 1292 ntTSL 5 BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 AC131274.3-201ENST00000578745 1271 ntBASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 FXYD3-207ENST00000604255 780 ntTSL 5 BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 OMA1-201ENST00000371226 1935 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 RPL15-202ENST00000354811 820 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 GGNBP1-201ENST00000374458 960 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 ABCD1P4-201ENST00000399687 604 ntBASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 AL031727.2-201ENST00000416470 207 ntTSL 2 BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 AC009948.2-201ENST00000437039 713 ntBASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 LINC00963-211ENST00000608369 961 ntTSL 5 BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 GGNBP1-206ENST00000618642 897 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 PGAM1P10-201ENST00000402426 761 ntBASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 CFAP36-205ENST00000407816 1125 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 ZBTB46-AS1-201ENST00000435912 533 ntTSL 3 BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 RN7SL452P-201ENST00000482923 291 ntBASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 CCDC58-206ENST00000497726 438 ntTSL 5 BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 AC095040.1-201ENST00000513286 675 ntBASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 IFITM9P-201ENST00000535743 396 ntBASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 HCFC1R1-206ENST00000574151 618 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 CCND3P2-201ENST00000579393 537 ntBASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 AL353997.3-201ENST00000586597 589 ntBASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 CDK10-221ENST00000617879 819 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 AL139220.2-209ENST00000626342 826 ntTSL 5 BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
SYNE2Q8WXH0 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SYNE2Q8WXH0 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
SYNE2Q8WXH0 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC5.66□□□□□ -1.5
SYNE2Q8WXH0 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SYNE2Q8WXH0 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SYNE2Q8WXH0 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SYNE2Q8WXH0 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SYNE2Q8WXH0 SEPT10-208ENST00000437928 1782 ntTSL 5 BASIC5.66□□□□□ -1.5
SYNE2Q8WXH0 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC5.66□□□□□ -1.5
SYNE2Q8WXH0 IGF2BP1-202ENST00000431824 1317 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SYNE2Q8WXH0 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC5.66□□□□□ -1.5
SYNE2Q8WXH0 FLII-221ENST00000578558 2377 ntTSL 5 BASIC5.66□□□□□ -1.5
SYNE2Q8WXH0 ABALON-201ENST00000629058 1903 ntBASIC5.66□□□□□ -1.5
SYNE2Q8WXH0 CDKN2AIPNLP2-201ENST00000274516 352 ntBASIC5.66□□□□□ -1.5
SYNE2Q8WXH0 CXorf40B-201ENST00000355203 1067 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
SYNE2Q8WXH0 RN7SKP245-201ENST00000364025 320 ntBASIC5.66□□□□□ -1.5
SYNE2Q8WXH0 MYCBP-203ENST00000494695 750 ntTSL 2 BASIC5.66□□□□□ -1.5
SYNE2Q8WXH0 AC116049.1-201ENST00000505282 385 ntBASIC5.66□□□□□ -1.5
SYNE2Q8WXH0 OPRM1-211ENST00000518759 1060 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms