Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
U2AF1L4Q8WU68 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
U2AF1L4Q8WU68 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
U2AF1L4Q8WU68 AP003398.1-201ENST00000531124 318 ntBASIC16.79■□□□□ 0.28
U2AF1L4Q8WU68 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC16.79■□□□□ 0.28
U2AF1L4Q8WU68 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC16.79■□□□□ 0.28
U2AF1L4Q8WU68 MEG3_2.1-201ENST00000611456 105 ntBASIC16.79■□□□□ 0.28
U2AF1L4Q8WU68 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
U2AF1L4Q8WU68 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
U2AF1L4Q8WU68 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
U2AF1L4Q8WU68 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
U2AF1L4Q8WU68 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
U2AF1L4Q8WU68 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
U2AF1L4Q8WU68 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
U2AF1L4Q8WU68 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC16.79■□□□□ 0.28
U2AF1L4Q8WU68 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
U2AF1L4Q8WU68 GSN-203ENST00000373808 2664 ntTSL 2 BASIC16.79■□□□□ 0.28
U2AF1L4Q8WU68 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
U2AF1L4Q8WU68 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC16.79■□□□□ 0.28
U2AF1L4Q8WU68 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
U2AF1L4Q8WU68 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
U2AF1L4Q8WU68 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
U2AF1L4Q8WU68 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
U2AF1L4Q8WU68 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.78■□□□□ 0.28
U2AF1L4Q8WU68 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
U2AF1L4Q8WU68 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.78■□□□□ 0.28
U2AF1L4Q8WU68 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
U2AF1L4Q8WU68 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
U2AF1L4Q8WU68 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
U2AF1L4Q8WU68 INE2-201ENST00000630399 1874 ntBASIC16.78■□□□□ 0.28
U2AF1L4Q8WU68 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
U2AF1L4Q8WU68 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
U2AF1L4Q8WU68 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.78■□□□□ 0.28
U2AF1L4Q8WU68 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC16.78■□□□□ 0.28
U2AF1L4Q8WU68 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC16.78■□□□□ 0.28
U2AF1L4Q8WU68 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
U2AF1L4Q8WU68 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
U2AF1L4Q8WU68 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
U2AF1L4Q8WU68 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC16.78■□□□□ 0.28
U2AF1L4Q8WU68 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC16.78■□□□□ 0.28
U2AF1L4Q8WU68 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC16.78■□□□□ 0.28
U2AF1L4Q8WU68 CHCHD2P9-201ENST00000461726 456 ntBASIC16.78■□□□□ 0.28
U2AF1L4Q8WU68 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
U2AF1L4Q8WU68 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC16.78■□□□□ 0.28
U2AF1L4Q8WU68 ALG1L6P-201ENST00000515248 758 ntBASIC16.78■□□□□ 0.28
U2AF1L4Q8WU68 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC16.78■□□□□ 0.28
U2AF1L4Q8WU68 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC16.78■□□□□ 0.28
U2AF1L4Q8WU68 DNM1P51-201ENST00000558149 522 ntBASIC16.78■□□□□ 0.28
U2AF1L4Q8WU68 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
U2AF1L4Q8WU68 AC092299.1-201ENST00000632679 757 ntBASIC16.78■□□□□ 0.28
U2AF1L4Q8WU68 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
U2AF1L4Q8WU68 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
U2AF1L4Q8WU68 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
U2AF1L4Q8WU68 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.78■□□□□ 0.28
U2AF1L4Q8WU68 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
U2AF1L4Q8WU68 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
U2AF1L4Q8WU68 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
U2AF1L4Q8WU68 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
U2AF1L4Q8WU68 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
U2AF1L4Q8WU68 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
U2AF1L4Q8WU68 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
U2AF1L4Q8WU68 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
U2AF1L4Q8WU68 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
U2AF1L4Q8WU68 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
U2AF1L4Q8WU68 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
U2AF1L4Q8WU68 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
U2AF1L4Q8WU68 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
U2AF1L4Q8WU68 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC16.77■□□□□ 0.28
U2AF1L4Q8WU68 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
U2AF1L4Q8WU68 AC084364.1-201ENST00000551967 1556 ntBASIC16.77■□□□□ 0.28
U2AF1L4Q8WU68 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC16.77■□□□□ 0.28
U2AF1L4Q8WU68 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
U2AF1L4Q8WU68 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
U2AF1L4Q8WU68 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
U2AF1L4Q8WU68 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC16.77■□□□□ 0.28
U2AF1L4Q8WU68 AC136759.1-202ENST00000530858 2194 ntBASIC16.77■□□□□ 0.28
U2AF1L4Q8WU68 LINC00528-201ENST00000600723 2160 ntBASIC16.77■□□□□ 0.28
U2AF1L4Q8WU68 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.77■□□□□ 0.28
U2AF1L4Q8WU68 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
U2AF1L4Q8WU68 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
U2AF1L4Q8WU68 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC16.77■□□□□ 0.28
U2AF1L4Q8WU68 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
U2AF1L4Q8WU68 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
U2AF1L4Q8WU68 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
U2AF1L4Q8WU68 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
U2AF1L4Q8WU68 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
U2AF1L4Q8WU68 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
U2AF1L4Q8WU68 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
U2AF1L4Q8WU68 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
U2AF1L4Q8WU68 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
U2AF1L4Q8WU68 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC16.77■□□□□ 0.28
U2AF1L4Q8WU68 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC16.77■□□□□ 0.28
U2AF1L4Q8WU68 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC16.77■□□□□ 0.28
U2AF1L4Q8WU68 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC16.77■□□□□ 0.28
U2AF1L4Q8WU68 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC16.77■□□□□ 0.28
U2AF1L4Q8WU68 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC16.77■□□□□ 0.28
U2AF1L4Q8WU68 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC16.77■□□□□ 0.28
U2AF1L4Q8WU68 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
U2AF1L4Q8WU68 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC16.77■□□□□ 0.28
U2AF1L4Q8WU68 AP003392.6-201ENST00000607709 325 ntBASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms