Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
NPAS3Q8IXF0 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPAS3Q8IXF0 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPAS3Q8IXF0 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPAS3Q8IXF0 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
NPAS3Q8IXF0 Z69890.1-201ENST00000382990 339 ntBASIC15.11■□□□□ 0.01
NPAS3Q8IXF0 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC15.11■□□□□ 0.01
NPAS3Q8IXF0 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC15.11■□□□□ 0.01
NPAS3Q8IXF0 ORAOV1P1-201ENST00000503108 395 ntBASIC15.11■□□□□ 0.01
NPAS3Q8IXF0 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC15.11■□□□□ 0.01
NPAS3Q8IXF0 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC15.11■□□□□ 0.01
NPAS3Q8IXF0 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
NPAS3Q8IXF0 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
NPAS3Q8IXF0 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC15.11■□□□□ 0.01
NPAS3Q8IXF0 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NPAS3Q8IXF0 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.11■□□□□ 0.01
NPAS3Q8IXF0 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC15.11■□□□□ 0.01
NPAS3Q8IXF0 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPAS3Q8IXF0 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPAS3Q8IXF0 ACE3P-201ENST00000423435 1973 ntBASIC15.11■□□□□ 0.01
NPAS3Q8IXF0 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.11■□□□□ 0.01
NPAS3Q8IXF0 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPAS3Q8IXF0 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
NPAS3Q8IXF0 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.1■□□□□ 0.01
NPAS3Q8IXF0 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NPAS3Q8IXF0 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPAS3Q8IXF0 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPAS3Q8IXF0 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPAS3Q8IXF0 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC15.1■□□□□ 0.01
NPAS3Q8IXF0 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPAS3Q8IXF0 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NPAS3Q8IXF0 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.1■□□□□ 0.01
NPAS3Q8IXF0 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPAS3Q8IXF0 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NPAS3Q8IXF0 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NPAS3Q8IXF0 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NPAS3Q8IXF0 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
NPAS3Q8IXF0 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NPAS3Q8IXF0 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPAS3Q8IXF0 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NPAS3Q8IXF0 MARK2P16-201ENST00000605714 1723 ntBASIC15.1■□□□□ 0.01
NPAS3Q8IXF0 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPAS3Q8IXF0 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPAS3Q8IXF0 MTATP6P19-201ENST00000413797 659 ntBASIC15.1■□□□□ 0.01
NPAS3Q8IXF0 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC15.1■□□□□ 0.01
NPAS3Q8IXF0 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC15.1■□□□□ 0.01
NPAS3Q8IXF0 AC018463.1-201ENST00000456674 917 ntBASIC15.1■□□□□ 0.01
NPAS3Q8IXF0 TMCO5B-205ENST00000530020 894 ntBASIC15.1■□□□□ 0.01
NPAS3Q8IXF0 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NPAS3Q8IXF0 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NPAS3Q8IXF0 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NPAS3Q8IXF0 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC15.1■□□□□ 0.01
NPAS3Q8IXF0 AC124068.2-201ENST00000569473 1109 ntBASIC15.1■□□□□ 0.01
NPAS3Q8IXF0 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC15.1■□□□□ 0.01
NPAS3Q8IXF0 AC073911.3-201ENST00000624401 631 ntBASIC15.1■□□□□ 0.01
NPAS3Q8IXF0 AL161773.1-201ENST00000624845 863 ntBASIC15.1■□□□□ 0.01
NPAS3Q8IXF0 AC005618.3-201ENST00000624928 458 ntBASIC15.1■□□□□ 0.01
NPAS3Q8IXF0 AP001184.1-201ENST00000637936 376 ntBASIC15.1■□□□□ 0.01
NPAS3Q8IXF0 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPAS3Q8IXF0 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPAS3Q8IXF0 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPAS3Q8IXF0 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.1■□□□□ 0.01
NPAS3Q8IXF0 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
NPAS3Q8IXF0 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPAS3Q8IXF0 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NPAS3Q8IXF0 AC138035.3-201ENST00000622706 2791 ntBASIC15.1■□□□□ 0.01
NPAS3Q8IXF0 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NPAS3Q8IXF0 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPAS3Q8IXF0 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPAS3Q8IXF0 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPAS3Q8IXF0 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPAS3Q8IXF0 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
NPAS3Q8IXF0 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPAS3Q8IXF0 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPAS3Q8IXF0 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPAS3Q8IXF0 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NPAS3Q8IXF0 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
NPAS3Q8IXF0 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC15.09■□□□□ 0.01
NPAS3Q8IXF0 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
NPAS3Q8IXF0 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPAS3Q8IXF0 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
NPAS3Q8IXF0 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
NPAS3Q8IXF0 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.09■□□□□ 0.01
NPAS3Q8IXF0 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
NPAS3Q8IXF0 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC15.09■□□□□ 0.01
NPAS3Q8IXF0 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
NPAS3Q8IXF0 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPAS3Q8IXF0 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPAS3Q8IXF0 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPAS3Q8IXF0 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
NPAS3Q8IXF0 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NPAS3Q8IXF0 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
NPAS3Q8IXF0 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC15.09■□□□□ 0.01
NPAS3Q8IXF0 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC15.09■□□□□ 0.01
NPAS3Q8IXF0 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
NPAS3Q8IXF0 AC012362.1-201ENST00000434906 739 ntBASIC15.09■□□□□ 0.01
NPAS3Q8IXF0 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC15.09■□□□□ 0.01
NPAS3Q8IXF0 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC15.09■□□□□ 0.01
NPAS3Q8IXF0 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NPAS3Q8IXF0 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms